Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0674 ATGGTAGCTTATGCAAATAGCCACACTTTCACCAGTGTCCCACACGCTGTTCGGCAGTGGAGGAAAGAGAAGGAGCTGTATAATCGATTGGAGAGCAAGGGCGTCATCAAGCGAAATGAGCCTCATGTATGCAGGGTTTGTGGGAGAAAGTTTTACACTAATGAAAAGCTTGTTAACCATTTCAAGCAGCTACATGAGAGCGAGCAAATGAAAAGGGTGAACCAGATAGCATCGGCAAAGGGGAACCGGAGGGTGAAGTTGGTGGCAAAGTATTCGATGAAGATGGAGAAGTATAAGAAGGCTGCAAGGGATATTCTTACTCCAAGAGTAGCGTATGGTTTGGTGGATGAGCTGAAACGCGCAGGGTTTTTGGTTCAGTCCGTGTTGGATAAGCCAGAAGCTGCGGATCATGCATTGGAAAGTCACATGGTGGATATGATGGATCATAGGTGGGTTGAATGCATAGTACTTGTGTCGGATGATTATGATTTCGCTAATGTAATAAGGGAAGCGAAGCTACGATGTCTAAAGACAGTTGTCATCGGGGATAATAACGATGGTGTATTGAAGAGGATTGTTGATACCTCCTTTTCTTGGGAGGAAATCCTAATGGGGAAAGCTAGAAAGGAGGCTGTATCGGTTGTTGAGAACTGGAAGGATCATGATATTTTGAAAAGGCTAGAGTGGAAATACAACCCAGAGGTGGATAAAAGGAAATATGGTACGGCTGACGTGGTTATTGAAGAATCAGAAGATGATAATATTGAAGGTGTTTGTGATGATGTTGATGATGACTATAAGGATGATGGAGGTTCTTGGTGGGAGTTAGATTCCAATGAAAATGTCACAAATGAACAGGCACGAAAATCATAA 873 0.4318 MVAYANSHTFTSVPHAVRQWRKEKELYNRLESKGVIKRNEPHVCRVCGRKFYTNEKLVNHFKQLHESEQMKRVNQIASAKGNRRVKLVAKYSMKMEKYKKAARDILTPRVAYGLVDELKRAGFLVQSVLDKPEAADHALESHMVDMMDHRWVECIVLVSDDYDFANVIREAKLRCLKTVVIGDNNDGVLKRIVDTSFSWEEILMGKARKEAVSVVENWKDHDILKRLEWKYNPEVDKRKYGTADVVIEESEDDNIEGVCDDVDDDYKDDGGSWWELDSNENVTNEQARKS* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0674 290 Pfam NYN domain 114 182 IPR021139 GO:0004540
Ahy12g0674 290 CDD PIN_LabA-like 52 183 - -
Ahy12g0674 290 ProSiteProfiles Zinc finger C2H2 type domain profile. 42 70 IPR013087 -
Ahy12g0674 290 MobiDBLite consensus disorder prediction 251 268 - -
Ahy12g0674 290 ProSitePatterns Zinc finger C2H2 type domain signature. 44 65 IPR013087 -
Ahy12g0674 290 MobiDBLite consensus disorder prediction 251 290 - -
Ahy12g0674 290 Gene3D - 4 203 - -
Ahy12g0674 290 PANTHER ZINC FINGER (C2H2 TYPE) FAMILY PROTEIN 1 283 - -
Ahy12g0674 290 PANTHER - 1 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0674 Ahy-Chr12 10791862 10795045 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g0674 1 287 C2H2 Transcription Factor Family AT4G12240 56.250 1.72e-115 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Ahy12g0674 NYN 2.70E-05 CL0280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0674 - - ahf:112726816 563.533