Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0667 ATGGAATTCTCCTCTTCCTCTTTGCAAATCACTCCCATTGAAGATCCATCCATACCACAAGAGTTTGATTTCGGTGATTGCTTCTCCATCATCTTCAATTGCACCAAAAAATTGATCCAAATTAGTGAAAGCTCAAACCCAGCTCTTGAGGTTCACTCTTCTTCTACGACAACTACAGCCACGGAAGCAATCTTGGTTCCTTCAGACATCCTATGTAGTGGTACTCCACTCACAGACCTCAGCAGAGAAGACACAATCTTGTTACATGAAATATTTTCTTCACTATCTGTGTCCCCTGAGCTATTTGACCAAATTTTACCTGACATAGTCGAAACTGCAAGAAGGTGTGACTCCAACACGCGGGAGATTGTTGTGAACCTTCATGTTACCTCGTACAATGTTGTTCAAGATTCTGATGCTGAATGCGCCATTTGTTTGGAGAAGTTTGACCATGGTAATGAAGATTCAAGCGTAGAGATTGTTCGTACAAATTGCTCGCATGTTTTTCATGATCGCTGCTTGCTCCACTGGCTCCGACGCTGTGCCAACTGTCAGTCGCCACATTCTTGCCCATTATGCCGCAGCATCATATTTCCAACTTCAGAGATAGATGATGAATAG 621 0.43 MEFSSSSLQITPIEDPSIPQEFDFGDCFSIIFNCTKKLIQISESSNPALEVHSSSTTTTATEAILVPSDILCSGTPLTDLSREDTILLHEIFSSLSVSPELFDQILPDIVETARRCDSNTREIVVNLHVTSYNVVQDSDAECAICLEKFDHGNEDSSVEIVRTNCSHVFHDRCLLHWLRRCANCQSPHSCPLCRSIIFPTSEIDDE* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0667 206 ProSiteProfiles Zinc finger RING-type profile. 142 194 IPR001841 -
Ahy12g0667 206 SMART ring_2 142 193 IPR001841 -
Ahy12g0667 206 Pfam Ring finger domain 141 194 IPR001841 -
Ahy12g0667 206 SUPERFAMILY RING/U-box 130 200 - -
Ahy12g0667 206 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 130 205 IPR013083 -
Ahy12g0667 206 PANTHER RING ZINC FINGER PROTEIN-RELATED 91 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0667 Ahy-Chr12 10697833 10698453 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g0667 142 198 C3H Transcription Factor Family AT4G12190 43.860 1.17e-09 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0667 - - adu:107495458 328.946