Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0647 ATGCCTCGTGGTACACTTGAAGTTGTTTTGATCAGTGCCAAAGGCCTTGATGGCAGTGATTTCCTCGCAAACATTGATCCTTATGTGATTCTCTCATACCGTTCTCAAGAGCACAAAAGCACTGTGGCAGAAGGTGCTGGATCCAACCCACAATGGAATGAAAGCTTTCTTTTCACTGTTTCTGACAGTGCTTGTGAGCTTAATCTGAAGATCATGGATAAAGACAATTTTAGTCAAGATGATTTCCTTGGCGAGGCAACGATTACTCTTGATGCAGTGTTTGATGAGGGTAGCCATCCAGAGACTTCTTACAATGTTGTGAAGGACAAAGAATACTGTGGAGAGATCAAGGTTGCTCTCACTTTTACTGCTGAGAGAGGTGGTGCTGGCCGGGACGAATACGGTGGACAGGAGGAGAGTTATGGTGGATGGAATGAATCAGCCAGGGACTTTTAG 456 0.4496 MPRGTLEVVLISAKGLDGSDFLANIDPYVILSYRSQEHKSTVAEGAGSNPQWNESFLFTVSDSACELNLKIMDKDNFSQDDFLGEATITLDAVFDEGSHPETSYNVVKDKEYCGEIKVALTFTAERGGAGRDEYGGQEESYGGWNESARDF* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0647 151 Gene3D C2 domain 2 124 IPR035892 -
Ahy12g0647 151 Pfam C2 domain 4 105 IPR000008 -
Ahy12g0647 151 PANTHER C2 DOMAIN-CONTAINING 1 151 - -
Ahy12g0647 151 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 1 123 IPR035892 -
Ahy12g0647 151 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Ahy12g0647 151 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 1 151 - -
Ahy12g0647 151 MobiDBLite consensus disorder prediction 128 151 - -
Ahy12g0647 151 SMART C2_3c 5 102 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0647 Ahy-Chr12 10410181 10412235 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g0647 4 118 C2H2 Transcription Factor Family AT4G21160 30.435 6.00e-12 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0647 - - adu:107473142 305.064