Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0646 ATGGCCTCCTTCTTTAACCTATTGATGATCATCATCTTTAGCTTCAAGAATTTTGCATCCACAAAAGCACAGGGTCCTAACTATCTCTTCATATATTGCGTGCTTCAAAACTTTACCGCCAACAGCACCTACCAAACAAACCTCAGGACTCTCTACTCTTCCTTATCTTCCAAAGCCAAAAACAGCATCGAATTCTACAACACGACCATCCGCCACGCCCACTCCGACGACACAGCTTACGGAATGTTCATGTGCAGGGGCGACACACCCTCCGCGCAATGCGGAGAGTGCGTCCAAAACGCAACCCTAACGCTGTTAAGCAATGGCTGTAAATCCTCCATAGAAGGGCTTGTATGGTACGACCAGTGCATGGTTAGGTATTCAAACACGTATTTCTTCTCCAAGTTATCCATGGAGCCATTCAAGGAGTATGTTAGTCCTACCAAACAGATTTACCAAGGAACCTTCAACAGAACCTTGTTTGAGACACTGAACAAGACGGCGGAGGAGGCGGCCAAGGCGCCGACCGGAAAGAAGAAGTTTGCGACGGAAGAAGCAGATCTGCCGGAGTTTCAGAAGCTTTACTGTTTGGCTCAGTGCACACCGGATCTGTCGCCGGAAGATTGCAGGAGTTGTTTGAACGTTTCTATAAACGGGAACGTTCCGCGGTGTTGTGGAGGAAGGGAGGGAGGGAGGGTTATGTATCCAAACTGCATGATCAGGTTTGAGCTTTACACTTTCTATGGATCTCCATCATCCCCTGCTCCAGCACCAACAGGTGTACTTCTCACTCCCCCCACAGTTGGTCATGAAAGTACCACTTTAGAAGGATTGCAATTTGATTTGAACGTACTTAAAGTGGCTACAAACAACTTTTCACTTGAGAACCTTATTGGCAAGGGAGGATTTGGAGAAGTTTATAAGGGCATTCTTCTTGATGGACGATTTATAGCTGTGAAAAGACTGAATACAAGTTCTAGACAAGGTTCAGATGAATTCAAGAACGAGATTTTATTGATAGCCAAACTTCAACACAGAAATCTTGTAACTTTGATAGGCTTTTGTCTCGATGAGCAAGAAAAAATTCTTATTTACGAATATATGCCAAATAGAAGTCTCGACTACCATTTATTTGGTGATCAACAACATAAATTAAGTTGGGTTGAACGTTTTAAAATTATTAAAGGGACTGCTTCAGGACTTCTTTATTTGCATGAATATTCTAGATTCAAAGTTATTCATCGAGATCTAAAATCTAGTAACATTTTATTAGATGAAGATATGAATCCAAAAATTTCAGATTTTGGTATGGCACGAATAGTTGATATAAATCAAGAAAAAGGAGAAACGAACAGGATTGTTGGTACATACGGGTATATGTCTCCCGAATATATAATGTTTGGACAATTTTCTGAAAAATCAGATATTTTTAGTTTTAGAGTCATAATTCTAGAACTTATTTACGGAGAAAAGAATGCACGCTTTCATGAATCACATGAAGAAAGCCTTTTAAGTTATGTTTGGAGACAATGGCAAGATGGAACACCTTTCAACACATTGGATCCAAATCTGAAAGAAAGTTATCATGTGGTGGAAGTCATGAAATGCATTCAAATTGGTTTATTATGTGTTCAAGAGAATATAAATGATAGACCCTCAATGGTGACAGTTGTTTCATATCTTAATAATCTTTCACTTGAATTACCATCTCCACATGAACCAGCATTCTTCACTCTTGGTAGATTCATGGATCCTAAAATCACAAATGAATCAAGTTCTAGCCAATCTGCCAAGAGTTTATTTTCAGTGAATGAAATGTCAATAAGTAAATTTCATCCTCGGTAG 1845 0.3973 MASFFNLLMIIIFSFKNFASTKAQGPNYLFIYCVLQNFTANSTYQTNLRTLYSSLSSKAKNSIEFYNTTIRHAHSDDTAYGMFMCRGDTPSAQCGECVQNATLTLLSNGCKSSIEGLVWYDQCMVRYSNTYFFSKLSMEPFKEYVSPTKQIYQGTFNRTLFETLNKTAEEAAKAPTGKKKFATEEADLPEFQKLYCLAQCTPDLSPEDCRSCLNVSINGNVPRCCGGREGGRVMYPNCMIRFELYTFYGSPSSPAPAPTGVLLTPPTVGHESTTLEGLQFDLNVLKVATNNFSLENLIGKGGFGEVYKGILLDGRFIAVKRLNTSSRQGSDEFKNEILLIAKLQHRNLVTLIGFCLDEQEKILIYEYMPNRSLDYHLFGDQQHKLSWVERFKIIKGTASGLLYLHEYSRFKVIHRDLKSSNILLDEDMNPKISDFGMARIVDINQEKGETNRIVGTYGYMSPEYIMFGQFSEKSDIFSFRVIILELIYGEKNARFHESHEESLLSYVWRQWQDGTPFNTLDPNLKESYHVVEVMKCIQIGLLCVQENINDRPSMVTVVSYLNNLSLELPSPHEPAFFTLGRFMDPKITNESSSSQSAKSLFSVNEMSISKFHPR* 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0646 614 Pfam Salt stress response/antifungal 36 129 IPR002902 -
Ahy12g0646 614 Pfam Salt stress response/antifungal 153 245 IPR002902 -
Ahy12g0646 614 SMART serkin_6 292 561 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy12g0646 614 ProSiteProfiles Gnk2-homologous domain profile. 26 132 IPR002902 -
Ahy12g0646 614 ProSiteProfiles Protein kinase domain profile. 292 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy12g0646 614 Gene3D Transferase(Phosphotransferase) domain 1 368 570 - -
Ahy12g0646 614 Gene3D - 26 132 IPR038408 -
Ahy12g0646 614 Gene3D - 141 247 IPR038408 -
Ahy12g0646 614 Pfam Protein kinase domain 294 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy12g0646 614 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 17 255 - -
Ahy12g0646 614 CDD STKc_IRAK 298 564 - -
Ahy12g0646 614 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 17 255 - -
Ahy12g0646 614 ProSitePatterns Serine/Threonine protein kinases active-site signature. 412 424 IPR008271 GO:0004672|GO:0006468
Ahy12g0646 614 ProSiteProfiles Gnk2-homologous domain profile. 138 247 IPR002902 -
Ahy12g0646 614 Gene3D Phosphorylase Kinase; domain 1 267 367 - -
Ahy12g0646 614 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 268 587 - -
Ahy12g0646 614 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 268 587 - -
Ahy12g0646 614 SUPERFAMILY Protein kinase-like (PK-like) 276 587 IPR011009 -
Ahy12g0646 614 ProSitePatterns Protein kinases ATP-binding region signature. 298 320 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0646 Ahy-Chr12 10380313 10385026 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g0646 2 614 Receptor kinase-like Gene Family AT4G05200 40.648 2.25e-168 494
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ahy12g0646 Pkinase 1.50E-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0646 - - ahf:112729661 1237.63