Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0636 ATGGGTTCAATTCTCAAATTTCGTAACATATATGGTTCCTTTAAATGCTTTCATTCTAAACCTAATTGGGGTTCCGGTGCTTCAGATAAAACCCCCAAATTGGAACCAAATAGGAATAACAATAGGGTAGGGATTTTTTGGGACTTAGATAACAAGCCACCAAACTCAATTCCACCTTTTGAAGTTGCCAATAAGCTTAGAATTGTTGCATCTTCATTTGGGGTTGTTAGGCATATGGTAGCTTATGCAAATAGTCACACTTTCACCAGTGTCCCACACGCTGTTCGGCAGTGGAGGAAAGAGAAGGAGCTGTATAACCGATTGGAGAGCAAAGGCGTCATCAAGCGGAATGAGTCTCATGTTTGCAGGGTTTGTGGGAGAAAGTTTTACACTAATGAGAAGCTTGTTAACCATTTCAAGCAGCTACATGAGAGCGAGCAAATGAAAAGGGTGAACCAGATAGCATCTGCAAGGGGGAACCGGAGGGTGAAGTTGGTGGCAAAGTATTCGATGAAGATGAAAAAGTATAAGAAGGCTGCAAGGGATATTCTTACTCCAAGGGTGGGGTATGGTTTGGCAGATGAGCTGAAACGCGCAGGATTTTGGGTTCAGTCCGTGTTGGATAAGCCACAACTGCGGATCATGCATTGGAAAGTCACATGGCATTGCAGCTGA 675 0.4356 MGSILKFRNIYGSFKCFHSKPNWGSGASDKTPKLEPNRNNNRVGIFWDLDNKPPNSIPPFEVANKLRIVASSFGVVRHMVAYANSHTFTSVPHAVRQWRKEKELYNRLESKGVIKRNESHVCRVCGRKFYTNEKLVNHFKQLHESEQMKRVNQIASARGNRRVKLVAKYSMKMKKYKKAARDILTPRVGYGLADELKRAGFWVQSVLDKPQLRIMHWKVTWHCS* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0636 224 ProSiteProfiles Zinc finger C2H2 type domain profile. 120 148 IPR013087 -
Ahy12g0636 224 PANTHER ZINC FINGER (C2H2 TYPE) FAMILY PROTEIN 31 212 - -
Ahy12g0636 224 ProSitePatterns Zinc finger C2H2 type domain signature. 122 143 IPR013087 -
Ahy12g0636 224 PANTHER - 31 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0636 Ahy-Chr12 10304203 10327454 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g0636 42 211 C2H2 Transcription Factor Family AT4G12240 64.118 8.55e-79 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Ahy12g0636 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0636 - - aip:107624837 457.218