Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0613 ATGAAAATGATTATGGAGGATGATGATATTGTTAGCAGGGAGGATGGTATAAAGGCAATAATAGAGGAGGAGCTTGTGAGAGGGCGTGAATTTGCCGATCAGTTAAGACAACTTATCGTCATCAATAAAGAAGATGATGACTCAGCTGATCATCAATGGCTTCTCAGTAACGTCCTCACCTCCTTCGCCAACACCCTCTCTCTCTTGAACAAATATCCCATACATCCAAATCCAATTCATCTTCACCAATCTTCTGCTTCTTCCTCTTCTTCCCATAATAGTGATCTTCTCATCATGCAAATGCAGCACCCGCAGATCCACCCTTGCTTGCTTACAGATGACAACCACATTTGCAAGACCCCGCCGCCGCCGGACACAAGAGGCTCTTACCGGAGAAAAAACATAGAGACATGGAAGAAGGAGACGGAGAATGAAAGAGAGGAGGATGGGCATCAATGGAGGAAGTATGGACAGAAGGCAATCCAGAATGAGAAATACACAAGGAACTACTTCCGATGCACTCACAAGTACGAACAGGGATGCCGAGCAACCAAGCAAGTTCAGAGAATTCAAGAGAAGCCTCCGTTGTACAGGGCCACCTATCATGGCCGCCACACCTGCACCAACACAGACACTACTAATAACCACGTACTCATCATGGAGGAATTAGATTACCCTACTTCCTCCTCCTCCTCCATATTCCTCAGCTTTGACAACTCCTTCCCTAATCCACCAACCAATCCCTTTCTCTCATCATCTTCTTCTTCGCTTTTCCCCTCAACAGCACCGCCGCTACCTGCGATGATGATAGTGGAAGAGGATCGGCAAGTTCTTCCCTCAACTACTTCAACTCACCCCGTTTTGGATGATTCGTCAAGGCATCATGTGGTCCCTATACTATCATCGTCAGAAAATAATAATATTTGCTGGGATGATATGATGATGATGGCTGCCATGTCTCAAGTGTTATACGATTCTGTTGATGAGGGATGA 993 0.4572 MKMIMEDDDIVSREDGIKAIIEEELVRGREFADQLRQLIVINKEDDDSADHQWLLSNVLTSFANTLSLLNKYPIHPNPIHLHQSSASSSSSHNSDLLIMQMQHPQIHPCLLTDDNHICKTPPPPDTRGSYRRKNIETWKKETENEREEDGHQWRKYGQKAIQNEKYTRNYFRCTHKYEQGCRATKQVQRIQEKPPLYRATYHGRHTCTNTDTTNNHVLIMEELDYPTSSSSSIFLSFDNSFPNPPTNPFLSSSSSSLFPSTAPPLPAMMIVEEDRQVLPSTTSTHPVLDDSSRHHVVPILSSSENNNICWDDMMMMAAMSQVLYDSVDEG* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0613 330 ProSiteProfiles WRKY domain profile. 142 205 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy12g0613 330 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 22 291 IPR044810 GO:0003700
Ahy12g0613 330 SUPERFAMILY WRKY DNA-binding domain 144 208 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy12g0613 330 SMART WRKY_cls 147 209 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy12g0613 330 Pfam WRKY DNA -binding domain 148 207 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy12g0613 330 Gene3D WRKY domain 133 209 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy12g0613 330 PANTHER WRKY TRANSCRIPTION FACTOR 70-RELATED 22 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0613 Ahy-Chr12 9864706 9866432 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g0613 18 212 WRKY Transcription Factor Family AT3G56400 35.784 3.47e-28 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Ahy12g0613 WRKY 1.00E-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0613 - - adu:107473290 556.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0613 12 9864706 9866432 Ahy2g0514 2 7344190 7346061 hybridization
Ahy14g2146 14 119912586 119915353 Ahy12g0613 12 9864706 9866432 PCT
Ahy4g1872 4 109322728 109325165 Ahy12g0613 12 9864706 9866432 PCT
Ahy12g0613 12 9864706 9866432 Ahy14g2146 14 119912586 119915353 PCT
Ahy12g0613 12 9864706 9866432 Ahy4g1872 4 109322728 109325165 PCT