Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0607 ATGGATATATATGCAAGGGTTTTGTTAATTGTTGAATTGGTATTGGTTCTTGGCTCTCTAGGATGGCGTATGAGGTTAATTACACCTTTTTCTTTCTTGCATTTCTTCATCTTTTCAACAGAACTCAAAGATCCATCACTGAAGCAAGTGCTTAAAGAGCAAGCTACAAAGATAATCTTCAATGCTCACGATGACATTAAACTTTTAGAGTATAAACCTTCAACTATTGCAGCATCTGCTCTTATCTCTGCATCTTGTGAACTATGTTTGCAACAATATACTATGCTGAGAGCTTCAATTGCAACTTGTGAGTATCTAGATGAGGAGAATTCATTGACCAAGTGCATTGACCTAATGCAAGAGATGGCTATGTGGACGGAAGCGAATGAGTCAACCATTGATACAAGCTTTCTAAGCATTGAAACTCCGGTGAGCGTGCTGGAGAGAAGCATCAAGCGGCTTGAATTGGCTCTGCAATAA 480 0.3896 MDIYARVLLIVELVLVLGSLGWRMRLITPFSFLHFFIFSTELKDPSLKQVLKEQATKIIFNAHDDIKLLEYKPSTIAASALISASCELCLQQYTMLRASIATCEYLDEENSLTKCIDLMQEMAMWTEANESTIDTSFLSIETPVSVLERSIKRLELALQ* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0607 159 Gene3D - 5 134 - -
Ahy12g0607 159 Pfam Cyclin, C-terminal domain 27 130 IPR004367 -
Ahy12g0607 159 Coils Coil 144 159 - -
Ahy12g0607 159 PANTHER CYCLINS 12 154 IPR039361 -
Ahy12g0607 159 SMART Cyclin_C_2 27 150 IPR004367 -
Ahy12g0607 159 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 12 154 - -
Ahy12g0607 159 SUPERFAMILY Cyclin-like 17 128 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0607 Ahy-Chr12 9763141 9763872 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g0607 15 155 Core Cell Cycle Gene Families AT4G03270 41.667 3.04e-25 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0607 K18812 - gmx:100799985 172.94