Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0591 ATGGAAGCCTCATTATCCCTCTCAATCTCTAATAATCTTCAAAATCAAAACATGGAAACCAGTAGTAATGATGCTCCTTCTCCTCATCAAGTAGAACACAACAACACAAGCACGACGAGTTCATCAACAGAAGAAGAAGAACCATTAGGAGGAAAATCAAAGAAGAAGAGGGAGAGAAGTAGTAGCAGTAGTAGTTGTAGTAGGGAGAGTGAGAAGCACGCGACATACAGGGGCGTGAGGATGAGAAACTGGGGGAAGTGGGTGTCAGAAATAAGGCAACCGAAAAAGAAAAACAGAATATGGTTAGGCACGTATCCAACTGCCGAAATGGCGGCAAGAGCGCATGACGTGGCAGCCTTGGCGATCAAAGGTGATTCCGCATTCCTCAACTTCCCTCAACTTGCATCTCTTCTTCCACGCCCTGCAACCACTTCGCCTAAAGATATCCAGGTTGCTGCTGCCATCGCCGCCAATGACACCGACTTTCAGTTTCATCAACCACCACCTTCTTCTTCTTCCTCCTCTTCATCTTCTTCTTCATCACAAGAACGTGATGACGATGGCGCATTGTTTGACTTGCCAGATCTTTTTCCTGCTGATGAGGATGGACTATGCTCCTATGCTTCATCGTCTTCTTCATCTTCATGGCAGTTCCGCATTGAGGATCCGTTGTTATTCTTCGCTTTCGACAACTACTAA 699 0.4592 MEASLSLSISNNLQNQNMETSSNDAPSPHQVEHNNTSTTSSSTEEEEPLGGKSKKKRERSSSSSSCSRESEKHATYRGVRMRNWGKWVSEIRQPKKKNRIWLGTYPTAEMAARAHDVAALAIKGDSAFLNFPQLASLLPRPATTSPKDIQVAAAIAANDTDFQFHQPPPSSSSSSSSSSSSQERDDDGALFDLPDLFPADEDGLCSYASSSSSSSWQFRIEDPLLFFAFDNY* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0591 232 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 16 209 - -
Ahy12g0591 232 MobiDBLite consensus disorder prediction 1 75 - -
Ahy12g0591 232 MobiDBLite consensus disorder prediction 47 75 - -
Ahy12g0591 232 MobiDBLite consensus disorder prediction 163 184 - -
Ahy12g0591 232 PRINTS Ethylene responsive element binding protein signature 76 87 IPR001471 GO:0003700|GO:0006355
Ahy12g0591 232 PRINTS Ethylene responsive element binding protein signature 98 114 IPR001471 GO:0003700|GO:0006355
Ahy12g0591 232 SMART rav1_2 75 138 IPR001471 GO:0003700|GO:0006355
Ahy12g0591 232 Pfam AP2 domain 76 124 IPR001471 GO:0003700|GO:0006355
Ahy12g0591 232 MobiDBLite consensus disorder prediction 1 46 - -
Ahy12g0591 232 MobiDBLite consensus disorder prediction 161 196 - -
Ahy12g0591 232 SUPERFAMILY DNA-binding domain 75 133 IPR016177 GO:0003677
Ahy12g0591 232 Gene3D AP2/ERF domain 75 133 IPR036955 GO:0003700|GO:0006355
Ahy12g0591 232 CDD AP2 76 132 IPR001471 GO:0003700|GO:0006355
Ahy12g0591 232 ProSiteProfiles AP2/ERF domain profile. 75 132 IPR001471 GO:0003700|GO:0006355
Ahy12g0591 232 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF043 16 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0591 Ahy-Chr12 9514836 9515743 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g0591 71 226 AP2-EREBP Transcription Factor Family AT2G44940 48.293 1.26e-53 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Ahy12g0591 AP2 5.50E-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0591 - - ahf:112726739 388.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0591 12 9514836 9515743 Ahy12g0591 12 9514836 9515743 ECH
Ahy12g0591 12 9514836 9515743 Ahy2g0501 2 7010051 7010776 hybridization