Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0583 ATGCATGGGAATAAGAGAAAGAAAGAGAGAGGGGATGAATTAGTAGATTACATAAGGAAAGGGCCATGGAAGAAAGAGGAAGATGAAGTGCTACTCAACCATGTAAGCAAGTATGGCCCCAGAGACTGGAGCTCCATTCGATCCAAGGGTCTTCTTCATAGAACCGGCAAGTCTTGTCGCCTTCGTTGGGTCAACAAGCTTCGACCTAACCTCAAGAATGGGTGCAAGTTTACAGCGGAGGAAGAGAGGGTTGTGATAGAATTGCAGGCACAATTTGGGAACAAATGGGCTAAGATTGCGTCCTATTTGAGTGGAAGAACAGACAATGATGTCAAGAATTTCTGGAGCAGTAGGCAGAAGAGGCTTGCTAGGATTCTTCAGGCATCAGCATCAACATCCACCTCCAAATCACACAGGAACAAACCTAAACTTCATCATCATCTTCCCACTTTCCAGGTAACCATTCTAACATTTCTCTTCTGTTTCCATGCCGTTTAA 498 0.4458 MHGNKRKKERGDELVDYIRKGPWKKEEDEVLLNHVSKYGPRDWSSIRSKGLLHRTGKSCRLRWVNKLRPNLKNGCKFTAEEERVVIELQAQFGNKWAKIASYLSGRTDNDVKNFWSSRQKRLARILQASASTSTSKSHRNKPKLHHHLPTFQVTILTFLFCFHAV* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0583 165 ProSiteProfiles Myb-like domain profile. 76 119 IPR001005 -
Ahy12g0583 165 SUPERFAMILY Homeodomain-like 18 115 IPR009057 -
Ahy12g0583 165 Pfam Myb-like DNA-binding domain 76 115 IPR001005 -
Ahy12g0583 165 Gene3D - 20 72 - -
Ahy12g0583 165 SMART sant 19 69 IPR001005 -
Ahy12g0583 165 SMART sant 73 121 IPR001005 -
Ahy12g0583 165 ProSiteProfiles Myb-like domain profile. 15 67 IPR001005 -
Ahy12g0583 165 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 18 71 IPR017930 -
Ahy12g0583 165 CDD SANT 22 67 IPR001005 -
Ahy12g0583 165 CDD SANT 76 115 IPR001005 -
Ahy12g0583 165 Pfam Myb-like DNA-binding domain 23 73 - -
Ahy12g0583 165 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 72 123 IPR017930 -
Ahy12g0583 165 PANTHER TRANSCRIPTION FACTOR DUO1 13 143 - -
Ahy12g0583 165 Gene3D - 75 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0583 Ahy-Chr12 9392196 9394030 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g0583 18 126 MYB Transcription Factor Family AT3G60460 87.156 1.26e-69 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Ahy12g0583 Myb_DNA-bind_6 1.80E-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0583 K09422 - zju:107422649 234.187