Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0568 ATGATGCAAGGGGAAGGAGAAGTGGAAAACATTCCGCACTGTACGATGTTGTTCCTTCACCGCCGTCTATGCACCACCGCCACCAGAACAAAGGTTCCTTCAAAGTACAAGAACCTTGCTCTCTCTCAAGCCCAGAAGATCCTCACTGATTACCTTCATTCCACAAGGTCCATCCCTTATGCCTTTGCTGATCAGATTGCTGCTAATTCTCACACTTCTATCTCTAACCTCATTGCAAAGGTGGGATTTTCAGCTCCGTCTTTCTCCCACACCCTCAACAAGTTCCTCAGTGTTCAGGTCATTGGGATATGTTTGGCTTTCCCTTTTGTTTTTGGTGAGCAGGGAGGAGTGTTGGAAGCTGAGATTGATGGGCTACTTGCTGATCTCAGGTTGGTTTTTCTGGATTTTGATTTGGCAGGGTTTGTTGAGGGGAATGCAGATTCTTGGTACGAGGTATGTAGGAAAATTCGGGTTTTTTACAATTTGAATAGTGAGAAGGGTAAGATGGGGGAACTCATTGGAAGGTATAAGAATGTGATTCTTGAGCATGGAGAAGAGGAGTTGATGCAGAAAGCTGAGTATTTTTCTAGGTTTGGTGTCAAGAAGGAGGAAGTAGCTCGATTGATCCTACATGACTCGGAATTGTTGAATTTTGATTTCGAAACGCCGGTGATCAATGTATTGAAGCTGTTGAAACACTTTGGCATGAGCTCCAAGGATCTCGAGGATGTGCAGCGAAACTATGCTCATGCATTGGGAACAATAAAAATGGTTAATTTGCCTAATGTAATGAGGGCTTTGGGTTTAAGTAAGTGGTTCTTTAATAGGATAAAGGACGGGACGCATCAACTCTTACTGACTTATGTCACAAGCTTTCCCAATGAAGACCAAGATAAAGGATATCAAGATGGTTTAAAGGCGATTCGTGCTTCGAGAACCCCAGTTCACACCATGAATAAACTGAATTTCTTGCATGCCTTAGGCTTTGGAGAAACTGCTTTGACCATGGCTATCCTAACTTACTTGAATGGGACTAGCAGCGAGTTACAGGAACGATTCGATTGCCTTCTTCATTTAGGGATTGAATTCTCAAAGCTCTCAAAGATAGTTGCAATTCGACCTAAGGTTCTAAGCCAACACCCGAAAATCATTGAGAAAAAGATTAAGTTCCTCTATGAGGAAATGGGATCCTCTGTGGAGCTTTTGGACACTTTTCCAGCATTCTTATGTTTTGACTTGGAAAAGCGCATTAAACCTAGGTTCAGATTCTATATGTGGATGATAGAAAAGGGTTATTGTGCCAAAAACTTCTCTATAGCAACCATGATTGCGACCAGCGACAAGAACTTTGTTCCTCATGCTTTTCGTATCCACCCAGCTGCTCCGAAACATTGGTTTGAGCAATTCTATCTCCGCAAATTGCCGGAATGA 1431 0.427 MMQGEGEVENIPHCTMLFLHRRLCTTATRTKVPSKYKNLALSQAQKILTDYLHSTRSIPYAFADQIAANSHTSISNLIAKVGFSAPSFSHTLNKFLSVQVIGICLAFPFVFGEQGGVLEAEIDGLLADLRLVFLDFDLAGFVEGNADSWYEVCRKIRVFYNLNSEKGKMGELIGRYKNVILEHGEEELMQKAEYFSRFGVKKEEVARLILHDSELLNFDFETPVINVLKLLKHFGMSSKDLEDVQRNYAHALGTIKMVNLPNVMRALGLSKWFFNRIKDGTHQLLLTYVTSFPNEDQDKGYQDGLKAIRASRTPVHTMNKLNFLHALGFGETALTMAILTYLNGTSSELQERFDCLLHLGIEFSKLSKIVAIRPKVLSQHPKIIEKKIKFLYEEMGSSVELLDTFPAFLCFDLEKRIKPRFRFYMWMIEKGYCAKNFSIATMIATSDKNFVPHAFRIHPAAPKHWFEQFYLRKLPE* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0568 476 Gene3D Transcription termination factor 3, mitochondrial 146 286 IPR038538 -
Ahy12g0568 476 Gene3D Transcription termination factor 3, mitochondrial 305 469 IPR038538 -
Ahy12g0568 476 PANTHER TRANSCRIPTION TERMINATION FACTOR MTEF18, MITOCHONDRIAL 25 97 - -
Ahy12g0568 476 PANTHER TRANSCRIPTION TERMINATION FACTOR MTEF18, MITOCHONDRIAL 94 469 - -
Ahy12g0568 476 PANTHER CGI-12 PROTEIN-RELATED 25 97 IPR003690 GO:0003690|GO:0006355
Ahy12g0568 476 PANTHER CGI-12 PROTEIN-RELATED 94 469 IPR003690 GO:0003690|GO:0006355
Ahy12g0568 476 SMART mt_12 399 431 IPR003690 GO:0003690|GO:0006355
Ahy12g0568 476 SMART mt_12 367 398 IPR003690 GO:0003690|GO:0006355
Ahy12g0568 476 SMART mt_12 206 237 IPR003690 GO:0003690|GO:0006355
Ahy12g0568 476 SMART mt_12 170 201 IPR003690 GO:0003690|GO:0006355
Ahy12g0568 476 Pfam mTERF 152 253 IPR003690 GO:0003690|GO:0006355
Ahy12g0568 476 Pfam mTERF 346 450 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0568 Ahy-Chr12 9202484 9204944 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Ahy12g0568 mTERF 1.30E-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0568 - - adu:107473184 917.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0568 12 9202484 9204944 Ahy12g0568 12 9202484 9204944 ECH