Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0546 ATGCATTATTGCAGTAACATTGCTCTCCTCTGGTTACATTCTGGAAATCCATTCACTCACGGATTCATTTGCTGTTGTTGTGATCTGTATCATATCATGGCCGAAGCACTTGTTGTTGGAGCTTTACTCTCTGGCTTCGCCAACGTTGTTCTTGACCGGCTCATTTCATCTGAGTTTGTCAACTTGGTGGTGAGCAAGAAGCTGGATCGGAAGCTGGTTGAGAGGCTTAAGACTGCTCTCTTGGCTGCCAAAGCTCTGGCTGGTGACGCTGAGCAGAAGCAGTTTGGAAACGAACTCGTCAGGGAGTGGCTTCATAGTCTCAGGGATGCTCTCTACACTGCTGATGACTTGCTGGACCGTGTCCTCATCAAAGCTGAAATTCGCAGCAAGGTACGCACCCGGCTTCCTAGCTTAATTAATTTGTCTGATAGGAAGATGGCGACCAAGATAGAAGAGGTGGTTAAAAGAATAGAAGATCTTCAGAAACTCAAAGATACTCTTGGTCTTAAAGAGATTCCAACGGGTAGCTCCTCATGGAGACCTCCATCCACTTCTCTTGAAAGGGGGATTGTGTACGGCAGGGATGATGACAAACAGGCATTAATCAAGATGCTAAATGACAACAATCATCATAACTTGTCCGTCATCTATATTGTTGGTATGGGCGGGGTTGGTAAAACTACTTTAGCACAATGCCTCTACAACAATACAGATTTGATGAAGGGGTTTGATCTGAAAGCATGGATTTGTGTTTCTGAAAATTTTGATATCGTTGAGACTACAAAGAATCTTATAAAGGAGATCACTTCCGGTGTTTGTTGTCTTGACGGCTTTAATTTACTTCAACAAGATTTGAAGGAAAAATTGTCGGAAAAGAAGTTCTTCGTTGTTTTGGACGATATTTGGAGTAACGATGGTGACAAGTGGAAAAGTTTTATTACTCCTTTTCAGCATGGGAGGAAGGGAAGTACTGTTCTTCTAACTACTCGCAAGGAAAATGTTGCTCCAATAGTCCAAAATTATAACTCTTACTTTCTCAATGGTCTGTCAGATGATTATTGCTGGTCTATTTTTGCGGACAATTCATCCTTTCCTGAATCAAATGGGAGCTCAGAACTTGAAGAAATAGGTAAAATGATTGTGAAGAAGTGTGATGGCTTGCCCTTAGCTGCAGAAACACTTGGACGCTTGTTGCGCTCAAAGCATGATGTAGAAGAATGGAATAAAATACTATCTAGTGACATTTGGGAATTTCCTGTTACAGATAGTAAGATTCTTCCAGCATTGTTAATAAGTTACTATCATCTGCCTGCCTATTTAAAACGATGCTTTGTTTATTGTTCATTGTATCCCAAAGACCATAAATTTGATAAAGATGAATTAATCTTGCTATGGATGGCTGAAGATCTTTTGCGAGCACCAAAGAGGAGAGAAACTTTGGAAGAAGTTGGTCATGAATGTTTTGATGACTTGGCTTCAAGACTATTTTTCAAGCAGCTCGAATATAGTGAGAAGTATTTTGTGATGCATGATCTCATGCATGACCTGGCAACTTTTCTTGCTGGAGAATTTTATTGTAGATTATCAGAAGAACTTGGTGAAAAGGAAGAGATGAGGATTCTGACTCGTCATTTGTCATGCGATTATCCAATCTTTGAAAAACTCTGTTCCTCTAAAAGTATAGAATCTTTGAGGACATTCTTGTTTATCAATAATGCTCAATTTCATGTTAGGATGCTAAGATATTGTTCAAGGTTGAGGATGCTACCCAATGGCATGTACAATCTTGTGAATTTGCGGCATCTTGATATATGGGGTACTCATCTAAAAGAAATGCCAAAGGGAATGAGCAAATTGAACCAGTTGCACATTTTAAGCAACTATATCGTAGGCAAGAATGAAGATAGTGGAATCCAAGAGTTAGGAGGGCTTCCAAATCTTCATGGATCATTTGGGATTCAGAAACTGGAGAATGTTATTTATGTCAATCAGGCAAGGAGTGCAAAGATAAGAGATAAGAAGCACATTGACGAATTATGGTTGGAATGGTCTTCAGGTGATGATATGGTTTCTGACACACAAACTGAAAGAGATATACTGGATAACTTGCAACCGCACAATGGCTTGAAAGAGTTGACAATATGGGGATACAGGGGTAAAACATTTCCAAATTGGGCGGGGCATTGTTCATACCAAAATATGACTAGTGTATCTCTAGAGTCTTGCAACAATTGCTACTTGCTGCCTTCACTTGGACAGCTGTCATCTCTTCAGTCCCTTCGCATTGATGATTTCGGAAAGCTCAAGAGTGTTGGCATGGAGTTTTACAAGAATGAAGGCTATCAACATTCTTCGCCTATTGCACTATTTCCCTCATTGCAGCTTTTGGAGTTTGATAACATGCCATGCTGGGAGGAGTGGTGCTTACCTGACTCAGAAGCTTTTCCTCAGCTTAAGAGACTTCAAATAAACGATTGTCCAATGTTAAAGGGAGGTATGCTTAATAGTGTGCTAATGCGAATCGTTTCTTCCTCGTTGGATGTTTTGAAAGTGAGCAAACTGGAAATACAAGAAGGTCATCAAGGATGGGGTAAAGAGATGACACTTGATGGAGACAGTTTATCATTTAGTGAATGTGAATCTGTGTTGGAGTATGCAATGGTCATCAACCATCTAACTTCCCTCCAAGAAATACACATCTCAGGGTGTTTGTCTGCTATATCCTTTCCAGGAAATTGTTTACCCAAGTCATTGCAAAAGCTCACAATCTTGAATTGCAGCAACCTGGAATTCCCCCAGCAACAGCAGCAGAAGTATGATTTGGTAGAGCTACGAATAGAACACAGCTGTGATTCACTGACCTCATTGTTGTTGGATGCCTTTCCCAATCTCAAGAATCTGGAGATAAGAGGGTGTTCAAATCTGGAATCAGTTTCAATGTCAGGGCCACCACACGCTGCTCTTCAACATCTCACCATCTCTAAATGCCTGAAATTAGTGGCATCTCCAGGAGAAGGACTGGCTGCACCCAACTTGACTCATCTCGATGTTAGCTGGTGCTCAAAGTTAGAGGCATTGCCACTTGACATGAATAGTCTTCTTTCAAGTTTACAGTCTCTTGACATTCGAGCTTGCCCGAACATTTGTAGGTTGCCAGAGGGTGGCTTGCTGCCTAAGTTAAGGTCACTTACTGTGGGAGGTTGCGAGCAACAGTTGAGGAGTCTATCATGGATGAGCAACTTGGACACCCTCACTCATCTTACCATTGATGGTTCTAACTGTGAAAGCATCAAGTCATTCCAAGAGGTGGGTTCGCTGCCTCAACTTAACACAGTGTCTCTTTCACTTTCCAAATCTGGAAACATTGGAGTGCAACGAGCTTCTCTGCCTCACTTCCCTCCAACAATTACATATTTCATTCTGTGA 3426 0.4124 MHYCSNIALLWLHSGNPFTHGFICCCCDLYHIMAEALVVGALLSGFANVVLDRLISSEFVNLVVSKKLDRKLVERLKTALLAAKALAGDAEQKQFGNELVREWLHSLRDALYTADDLLDRVLIKAEIRSKVRTRLPSLINLSDRKMATKIEEVVKRIEDLQKLKDTLGLKEIPTGSSSWRPPSTSLERGIVYGRDDDKQALIKMLNDNNHHNLSVIYIVGMGGVGKTTLAQCLYNNTDLMKGFDLKAWICVSENFDIVETTKNLIKEITSGVCCLDGFNLLQQDLKEKLSEKKFFVVLDDIWSNDGDKWKSFITPFQHGRKGSTVLLTTRKENVAPIVQNYNSYFLNGLSDDYCWSIFADNSSFPESNGSSELEEIGKMIVKKCDGLPLAAETLGRLLRSKHDVEEWNKILSSDIWEFPVTDSKILPALLISYYHLPAYLKRCFVYCSLYPKDHKFDKDELILLWMAEDLLRAPKRRETLEEVGHECFDDLASRLFFKQLEYSEKYFVMHDLMHDLATFLAGEFYCRLSEELGEKEEMRILTRHLSCDYPIFEKLCSSKSIESLRTFLFINNAQFHVRMLRYCSRLRMLPNGMYNLVNLRHLDIWGTHLKEMPKGMSKLNQLHILSNYIVGKNEDSGIQELGGLPNLHGSFGIQKLENVIYVNQARSAKIRDKKHIDELWLEWSSGDDMVSDTQTERDILDNLQPHNGLKELTIWGYRGKTFPNWAGHCSYQNMTSVSLESCNNCYLLPSLGQLSSLQSLRIDDFGKLKSVGMEFYKNEGYQHSSPIALFPSLQLLEFDNMPCWEEWCLPDSEAFPQLKRLQINDCPMLKGGMLNSVLMRIVSSSLDVLKVSKLEIQEGHQGWGKEMTLDGDSLSFSECESVLEYAMVINHLTSLQEIHISGCLSAISFPGNCLPKSLQKLTILNCSNLEFPQQQQQKYDLVELRIEHSCDSLTSLLLDAFPNLKNLEIRGCSNLESVSMSGPPHAALQHLTISKCLKLVASPGEGLAAPNLTHLDVSWCSKLEALPLDMNSLLSSLQSLDIRACPNICRLPEGGLLPKLRSLTVGGCEQQLRSLSWMSNLDTLTHLTIDGSNCESIKSFQEVGSLPQLNTVSLSLSKSGNIGVQRASLPHFPPTITYFIL* 1142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0546 1141 Pfam NB-ARC domain 195 412 IPR002182 GO:0043531
Ahy12g0546 1141 Pfam Rx N-terminal domain 59 129 IPR041118 -
Ahy12g0546 1141 Gene3D - 184 344 IPR027417 -
Ahy12g0546 1141 PANTHER DISEASE RESISTANCE PROTEIN RP 58 908 IPR044974 GO:0006952
Ahy12g0546 1141 PANTHER OS05G0414200 PROTEIN 58 908 - -
Ahy12g0546 1141 Gene3D - 432 519 IPR036388 -
Ahy12g0546 1141 Gene3D - 48 166 - -
Ahy12g0546 1141 PRINTS Disease resistance protein signature 1032 1048 - -
Ahy12g0546 1141 PRINTS Disease resistance protein signature 384 398 - -
Ahy12g0546 1141 PRINTS Disease resistance protein signature 215 230 - -
Ahy12g0546 1141 PRINTS Disease resistance protein signature 288 302 - -
Ahy12g0546 1141 CDD AAA 192 303 - -
Ahy12g0546 1141 Gene3D Ribonuclease Inhibitor 845 1033 IPR032675 -
Ahy12g0546 1141 Gene3D Ribonuclease Inhibitor 1034 1136 IPR032675 -
Ahy12g0546 1141 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 189 447 IPR027417 -
Ahy12g0546 1141 Gene3D - 348 431 IPR042197 -
Ahy12g0546 1141 Gene3D Ribonuclease Inhibitor 556 844 IPR032675 -
Ahy12g0546 1141 SUPERFAMILY L domain-like 505 1060 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0546 Ahy-Chr12 8819119 8824968 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g0546 203 401 WRKY Transcription Factor Family AT5G45050 27.358 2.63e-08 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0546 - - aip:107624780 2295.78