Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0545 ATGGTGACTAAGATAGAAGAGGTGGTTAAAACAATAGAAGATCTTGAGAAACTCAAAGATACCCTTGGTCTTGAAAAGATTCCAACGAGTAGCTCCTCATGGAGACCTCCATCCACTTCTCTTGTAAAGGGGAATGTGTACGGCAGGGATGGTGATCAACAGGCACTAATCAAGATGCTCAATGACAACAATGATCATAACTTGTCCGTCAGCTCTATTGTTGGTATGGGTGGGGTTGGTAAAACTACTTTAGCACAATGGCTGTTCAACAATAAGGATTTGATGGACGGGGTTGATCTGAAAGCATGGATTTGTGTTTCTGAAAATTTTGATGTTGTTGAGACTACTAAGAATGTTATAAAGGGGATCTCTTCAGGTGTTTGTAGTCTTGACAGCTTTGATTTACTTCAACAACATTTGAAGGAAAAACTGTCAGAAAAGAAGTTCTTCATTGTTTTGGACGATGTTTGGAGTGAAGATGTTGACAAGTGGAATAGTTTTGTCACCCCTTTTCAACATGGGAGAAAAGGAAGCACTATTCTTCTAACTACCTGCAAGGAAAATGTTGGTCGAATAGTCCAACACTATAACTCTTACACTCTCAAGGAACTGTCAGACGATTATTGTTGGTCTATTTTTGCGGACAATGCATCCTTTCCTGAATCAAATGGGAGCTCGGAACTGGAAGAAATAGGTAGAAAGATTGTCAAGAGGTGTGATGGTTTGCCATTAGCTGCAGAAACACTTGGATGCTTGCTGCGCTCAGAGCGTCGTGTTGAAGAATGGAATAAAATACTATCAAATGACATTTGGGAATTTCCTATGCCAAATAGTAAAATTTTTCCTGCATTGTTAATAAGTTACTATCATCTTCCTGAACATTCAAAACGCTGCTTTGTTTATTGTTTGTTGTATCCCAAAGATTATCAATTTGATAAAGATGAATTAATCTTGCTATGGATGGCTGAAAATCTTTAA 978 0.3824 MVTKIEEVVKTIEDLEKLKDTLGLEKIPTSSSSWRPPSTSLVKGNVYGRDGDQQALIKMLNDNNDHNLSVSSIVGMGGVGKTTLAQWLFNNKDLMDGVDLKAWICVSENFDVVETTKNVIKGISSGVCSLDSFDLLQQHLKEKLSEKKFFIVLDDVWSEDVDKWNSFVTPFQHGRKGSTILLTTCKENVGRIVQHYNSYTLKELSDDYCWSIFADNASFPESNGSSELEEIGRKIVKRCDGLPLAAETLGCLLRSERRVEEWNKILSNDIWEFPMPNSKIFPALLISYYHLPEHSKRCFVYCLLYPKDYQFDKDELILLWMAENL* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0545 325 Gene3D - 38 199 IPR027417 -
Ahy12g0545 325 PRINTS Disease resistance protein signature 70 85 - -
Ahy12g0545 325 PRINTS Disease resistance protein signature 143 157 - -
Ahy12g0545 325 PRINTS Disease resistance protein signature 239 253 - -
Ahy12g0545 325 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 302 IPR027417 -
Ahy12g0545 325 Coils Coil 5 25 - -
Ahy12g0545 325 PANTHER DISEASE RESISTANCE PROTEIN RP 4 325 IPR044974 GO:0006952
Ahy12g0545 325 PANTHER OS05G0414200 PROTEIN 4 325 - -
Ahy12g0545 325 Pfam NB-ARC domain 53 267 IPR002182 GO:0043531
Ahy12g0545 325 Gene3D - 287 325 IPR036388 -
Ahy12g0545 325 Gene3D - 203 286 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0545 Ahy-Chr12 8802177 8803154 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g0545 75 261 WRKY Transcription Factor Family AT5G45050 27.273 1.90e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0545 - - ahf:112729622 659.833