Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0544 ATGATGCAGATCCTATGCGGTGTTGACTCGTGTCACCGGAACATGATCGTGCATCGGGATTTGAAGCCCGGTAATCTGTTGATCGGAGATGATGGAATTCTCAAGTTGGCAGATTTTGGACAGGCAAGGATACTTGGGGAGCCAGGATTTGATACTTCTGAGGAGAACCCACAAGCTTATGAACATGATGGTTCTTCACTCCAAGCAGGGTCTGGAAATCAAGAGCAGGGAACTGTCCTTCGCGAAGAATATTTTAGAGTCTTGGATGAACTGAAAACAAAGAGATCTGCAGATGACATTGATAAGGATACAAACATTCCTGATGGAAATACCTCCTGTCTTGCAACGTGCACAACAAGTGATATAGATGATGACCCTTTGAAATCCAGCTTTACTTATGAAGCAAGGGAGGACGAAGGAGAAGAATCGGGTTGTCTCACGTCGTGCGTTGGAACTCGTTGGTTTAGGGCTCCTGAGCTCCTTTATGGATCCACAAACTATGGTTTAGAAATTGATCTATGGTCTTTGGGATGTATATTTGCAGAGCTCTTTACACTGGAGCCCTTATTTCCTGGAACAGCCGATATTGATCAGCTTAGTAGGATTATTAATGTTTTGGGCAACCTCGACGAGAAAGCATGGCCAGGTTGTTCCAAACTTCCCGATTATGGAATAATCTCATTTAGTAAGGTGGAAAACCCTCCTGGGCTTGAAGCTTGCCTGCCCAATCGCTCCCTCGACGAAGTGTCTCTAGTAAAAAAGCTGGTTTGTTATGATCCGGCCAAGAGAGCTACAGCAACGGAGCTACTCCATGACAAGTACTTTAATGAAGAACCTCTTCCTGTTCCGGTTTCAGAGTTGCATGTTCCTTTGAACAGAAAGGGAGAAGATGAAAACTCTCCGTGGCATGATTACAATTACATGGGTTCTGATTCTGACCTGGAGGACTTTGGCCCTGTGAATATCACAAAAACTGCACTTCTTGTTGGAGCTTTAGTTTCTGGCTTCGCCAATGTTGTTCTTGACAGGCTCATTTAA 1038 0.4451 MMQILCGVDSCHRNMIVHRDLKPGNLLIGDDGILKLADFGQARILGEPGFDTSEENPQAYEHDGSSLQAGSGNQEQGTVLREEYFRVLDELKTKRSADDIDKDTNIPDGNTSCLATCTTSDIDDDPLKSSFTYEAREDEGEESGCLTSCVGTRWFRAPELLYGSTNYGLEIDLWSLGCIFAELFTLEPLFPGTADIDQLSRIINVLGNLDEKAWPGCSKLPDYGIISFSKVENPPGLEACLPNRSLDEVSLVKKLVCYDPAKRATATELLHDKYFNEEPLPVPVSELHVPLNRKGEDENSPWHDYNYMGSDSDLEDFGPVNITKTALLVGALVSGFANVVLDRLI* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0544 345 Gene3D Transferase(Phosphotransferase) domain 1 1 282 - -
Ahy12g0544 345 SMART serkin_6 1 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy12g0544 345 PANTHER CELL DIVISION PROTEIN KINASE 1 295 - -
Ahy12g0544 345 SUPERFAMILY Protein kinase-like (PK-like) 1 281 IPR011009 -
Ahy12g0544 345 PANTHER CYCLIN-DEPENDENT KINASE 10 1 295 - -
Ahy12g0544 345 ProSiteProfiles Protein kinase domain profile. 1 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy12g0544 345 MobiDBLite consensus disorder prediction 59 75 - -
Ahy12g0544 345 MobiDBLite consensus disorder prediction 47 75 - -
Ahy12g0544 345 ProSitePatterns Serine/Threonine protein kinases active-site signature. 16 28 IPR008271 GO:0004672|GO:0006468
Ahy12g0544 345 Pfam Protein kinase domain 143 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy12g0544 345 Pfam Protein kinase domain 1 49 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0544 Ahy-Chr12 8798605 8801954 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g0544 1 326 Core Cell Cycle Gene Families AT4G28980 60.870 1.41e-148 426
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CCRK Ahy12g0544 Pkinase 8.70E-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0544 - - aip:107626750 700.664