Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0521 ATGAATTCAAAACCATTCCAAGAGATTTTCATCAACCAAAACTGTAACTACTCATTCTGTGATGAATGCATTGCAAAATATATAGCTGCAAAGATTCAAGAGAATATATCAAATGTGAAGTGTCCTGAACCAAAATGCAGAGGAATATTGGAGCCTCAGAATTGCATGTCAATAATTCCAAAGGAGGTGTTTGAAAGATGGGAGAATGCACTTTGTGAGAATCTTGTTCTTGCAACATCAAAGAAATTCTATTGCTCTTTCAAGGATTGTTCAACAATGTTGGTGAATGATGATGGGAATGAAGTTGTGACTTGTTCTGAGTGTCCAAATTGTCATAGATTGTTTTGTGCACAGGGTAAAGTTGCATGGCATGGTGGAATGGAATGTGGTGAGTTTATGGGTTTGAATGAAAATGAAAGAGAGAAGGAAGATCTTATGGTGATGAATCTTGCAAAGGCTAATAAGAGATGGAGAAGGTGTGGCCATCGCTTCTGCTATGCTTGTGGAAAGCCATGGAATCAGTAA 525 0.3771 MNSKPFQEIFINQNCNYSFCDECIAKYIAAKIQENISNVKCPEPKCRGILEPQNCMSIIPKEVFERWENALCENLVLATSKKFYCSFKDCSTMLVNDDGNEVVTCSECPNCHRLFCAQGKVAWHGGMECGEFMGLNENEREKEDLMVMNLAKANKRWRRCGHRFCYACGKPWNQ* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0521 174 ProSiteProfiles TRIAD supradomain profile. 1 174 IPR044066 -
Ahy12g0521 174 Pfam IBR domain, a half RING-finger domain 65 129 IPR002867 -
Ahy12g0521 174 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 2 160 IPR031127 GO:0004842|GO:0016567
Ahy12g0521 174 PANTHER RBR-TYPE E3 UBIQUITIN TRANSFERASE 2 160 - -
Ahy12g0521 174 SMART ibrneu5 65 129 IPR002867 -
Ahy12g0521 174 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 80 IPR013083 -
Ahy12g0521 174 SUPERFAMILY RING/U-box 3 74 - -
Ahy12g0521 174 SUPERFAMILY RING/U-box 65 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0521 Ahy-Chr12 8461116 8462239 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g0521 10 171 C3H Transcription Factor Family AT2G19610 21.466 1.66e-06 45.1