Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0501 ATGTCTAAGTTAAAACAAGCATTCACCCAACTCACTCATTCTTCCACTAACAACAACAAGAAAAAGAAGCTCTTCTTGTCTCTCTTCGCCACCCTCCTCCTCGTCGCCTCCGTGGTTGCCATAGTCGCCGGCGTAAACTCCCACAAAAACAACAACTCCTCTTCCTCCTCTTCTCTCGCACTCTCTCACCACTCCCACACCATCATCAAAAACGCTTGCAGCTCCACATTCTACCAAGACCTCTGTTTCTCGGCCGTCTCCTCCGAGCCTGGCGTGACAAACAAGGTCACTTCTCACAAAGATGTCATTGAATTGTCCCTCAACGTTACTTGCAGGACCGTCGAGCACAACTTCTTTGTTATCAAGAAGATTCTCGAGGAGCGGGAGAAGATCCTCACCCACAGGGAGAGGATCGCCCTCCACGACTGCCTTGAGACCATTGACGAGTCCCTTGACGAGCTCCATCAGGCCTACGAGGACATCAAGCTCTATCCTAACTCTAACAAGAAGACTCTCTACCAGCACGCCGATGATCTCAACACTCTTATTAGTGCCGCCATAACCAACCAGGTGACTTGCTTGGACGGTTTCTCGCACGACGCGGCGGACAAGAATGTAAGGAAGGCTCTAGAAGAAGGTCAGGTACACGTGGAGCACATGTGCAGCAACGCATTGGCTATGACGAAGAACATGACCGACACCGACATCGCAAACTACGAACAGAAAATGATGACGACGGCGACGGCGAACGGAGGAAGGAAGTTGATGATGATGGAGGAAGAAGAAGACGAGAAGGGAGTAAAGTGGCCGCAGTGGATGTCGGTTGGTGACAGGAGGCTGTTGCAGGCGGCGACGGTGAAGGCGGACGTTGTGGTGGCGGCGGACGGGAGCGGGAACTTCAAGACAGTGTCGGAGGCGGTGAAGGCGGCGCCGGAGAAGAGTAGCAAGAGGTATGTGATTAAGATCAAAGCTGGTGTATACAGAGAGAATGTTGAAGTGCCGAAGAAGAAGACGAATATAATGTTCTTGGGAGATGGAAGAACCAACACCATTATCACCGGAAGTAGAAACGTTAAAGATGGCGACACCACCTTCAACTCCGCCACCGTCGCCGTTGTGGGACCAAACTTTCTTGCAAGAGACATAACCTTCCAAAACACAGCCGGAGCAGCAAAGCACCAAGCGGTGGCACTTCGAGTCGGTGGCGACCTCTCAGCTTTCTACAACTGCGATATCCTCGCCTACCAAGACACCCTCTATGTCCACAACAACCGTCAATTCTTTGTCAATTGCCTCGTCGTGGGCACCGTCGACTTTATCTTTGGTAATTCAGCCGCAGTTTTTCAAAACTGCGACATCCATGCCCGGCGCCCTGACCCTGGTCAGAAGAACATGGTCACGGCGCAGGGCAGGGTTGACCCTAACCAAAACACCGGAATTGTGATCCAAAAATGTAGGATTGGTGCCACCACGGATTTGGAGCCTGTGAAGAAGAGTTTCCCTACCTACCTTGGTAGGCCATGGAAGGAGTACTCTAGAACCGTGATCATGCAAAGCACCATAAGCGATGTAATTCAACCTGTTGGATGGCATGAGTGGAATGGAGACTTTGCACTAAATACTTTGGTTTATAGAGAGTACCAAAATACTGGGCCTGGTGCTGGTACTTCTGCTAGGGTTACCTGGAAGGGCTATAAGGTAATTACAAATGCTGCTGAGGCCCAGGCTTTTACAGCTGGGGCCTTCATTGGGGGTTCTAATTGGTTGGGCTCAACAGGCTTCCCTTTCTCTCTTGGGTTATAA 1803 0.5092 MSKLKQAFTQLTHSSTNNNKKKKLFLSLFATLLLVASVVAIVAGVNSHKNNNSSSSSSLALSHHSHTIIKNACSSTFYQDLCFSAVSSEPGVTNKVTSHKDVIELSLNVTCRTVEHNFFVIKKILEEREKILTHRERIALHDCLETIDESLDELHQAYEDIKLYPNSNKKTLYQHADDLNTLISAAITNQVTCLDGFSHDAADKNVRKALEEGQVHVEHMCSNALAMTKNMTDTDIANYEQKMMTTATANGGRKLMMMEEEEDEKGVKWPQWMSVGDRRLLQAATVKADVVVAADGSGNFKTVSEAVKAAPEKSSKRYVIKIKAGVYRENVEVPKKKTNIMFLGDGRTNTIITGSRNVKDGDTTFNSATVAVVGPNFLARDITFQNTAGAAKHQAVALRVGGDLSAFYNCDILAYQDTLYVHNNRQFFVNCLVVGTVDFIFGNSAAVFQNCDIHARRPDPGQKNMVTAQGRVDPNQNTGIVIQKCRIGATTDLEPVKKSFPTYLGRPWKEYSRTVIMQSTISDVIQPVGWHEWNGDFALNTLVYREYQNTGPGAGTSARVTWKGYKVITNAAEAQAFTAGAFIGGSNWLGSTGFPFSLGL* 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0501 600 PANTHER PECTINESTERASE 19 599 - -
Ahy12g0501 600 PANTHER PECTINESTERASE 19 599 - -
Ahy12g0501 600 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 67 232 IPR035513 -
Ahy12g0501 600 ProSitePatterns Pectinesterase signature 2. 433 442 IPR033131 -
Ahy12g0501 600 Pfam Pectinesterase 289 585 IPR000070 GO:0030599|GO:0042545
Ahy12g0501 600 SUPERFAMILY Pectin lyase-like 284 599 IPR011050 -
Ahy12g0501 600 SMART PMEI_2 64 227 IPR006501 GO:0004857
Ahy12g0501 600 Pfam Plant invertase/pectin methylesterase inhibitor 68 227 IPR006501 GO:0004857
Ahy12g0501 600 Gene3D Invertase/pectin methylesterase inhibitor family protein 64 232 IPR035513 -
Ahy12g0501 600 CDD PMEI-like_3 72 232 - -
Ahy12g0501 600 Gene3D - 283 600 IPR012334 -
Ahy12g0501 600 TIGRFAM PME_inhib: pectinesterase inhibitor domain 55 231 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0501 Ahy-Chr12 8227930 8234441 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g0501 14 600 Carbohydrate Esterase AT3G14310 68.386 0.0 801
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0501 K01051 - pvu:PHAVU_010G123100g 875.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0501 12 8227930 8234441 Ahy2g0446 2 6222539 6226425 hybridization