Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0495 ATGGAAATTACACAACAACACAACACCACTACCAAACATAAAGCTGCTGCTGCTGCTTCTTCTTCTTCAACAACTTCACCTTATTATTATTCCAAGATTGGTTTTGCTGCTTCATCAGAGAGGAGTAGTGGTGTTGGAGGTGGGTATGCTTCATCTTCTTCACTGGTTTTGGATAGGGTGAAGGGTGAGTTGGTTGAGGCACCTGTGAAATTAGAGCGCAAGGGTGTGTTCCCTGAGAGAACCATTGAAGCTTTGAAGAACCACAGTGAAGCTGAGAGGAGGAGAAGAGCTAGAATCAATGCTCACCTTGATACACTCAGAACTGTCATCCCTGCTGCTAACAAGATGGACAAAGCATCATTACTGGCTGAGGTTATTAGACATCTGAAGGAGCTGAAAACGAAAGCAGCACAAGCATGTCAAGGCCTAATGATACCAAAGGACAATGATGAATTAAGAGTTGAAGAACAAGAAGGTGGATTGAATGGCTTCCCTTATTCAATAAGAGCATCTCTATGCTGCGAATACAAACCCGGCTTGTTATCTGATATAAGACAAGCACTTGATGCACTTCATCTTATGATAATAAGCGCAGAGATCGCGACGTTAGGAGGCAGGATGAAGAATGTATTTGTGATAATCAGCTGTGAAGAACAGAGCTTTGAAGATGCTGAGTATAGGCAGTTCCTGGCCGGATCGGTTCACCAAGCTCTTAGGTCTGTTCTTGATAGATTTTCTGTTTCACAGGACATCTTAGAGTCTAGAAAGAGGAGGAGAATTTCTATATTCAGTTCATCATCCTTGGAAGATTTTTTGTAA 819 0.4225 MEITQQHNTTTKHKAAAAASSSSTTSPYYYSKIGFAASSERSSGVGGGYASSSSLVLDRVKGELVEAPVKLERKGVFPERTIEALKNHSEAERRRRARINAHLDTLRTVIPAANKMDKASLLAEVIRHLKELKTKAAQACQGLMIPKDNDELRVEEQEGGLNGFPYSIRASLCCEYKPGLLSDIRQALDALHLMIISAEIATLGGRMKNVFVIISCEEQSFEDAEYRQFLAGSVHQALRSVLDRFSVSQDILESRKRRRISIFSSSSLEDFL* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0495 272 Pfam Helix-loop-helix DNA-binding domain 87 132 IPR011598 GO:0046983
Ahy12g0495 272 MobiDBLite consensus disorder prediction 1 25 - -
Ahy12g0495 272 PANTHER TRANSCRIPTION FACTOR BHLH30 41 272 IPR045847 GO:0003700|GO:0006355
Ahy12g0495 272 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 41 272 - -
Ahy12g0495 272 SMART finulus 89 138 IPR011598 GO:0046983
Ahy12g0495 272 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 83 132 IPR011598 GO:0046983
Ahy12g0495 272 Gene3D - 79 140 IPR036638 GO:0046983
Ahy12g0495 272 SUPERFAMILY ACT-like 171 248 IPR045865 -
Ahy12g0495 272 ProSiteProfiles ACT domain profile. 169 254 IPR002912 -
Ahy12g0495 272 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 85 140 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0495 Ahy-Chr12 8053927 8056448 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g0495 70 261 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 40.306 1.06e-32 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy12g0495 HLH 3.10E-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0495 - - lja:Lj3g3v2848980.1 371.703