Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0459 ATGGCTTCTGCTTGTGCTTCCTCTGCCATTGCAGCTGTTGCCATCTCTTCCCCAAGTTCTCAGAAGAATGGATCACAGTTGGGAACCACAAAAGCTTCATTTCTTAGTGGAAGGAAGCTTAAGTTGAACAACTTCACAGCACCAACTACTGGAGCTAGATCCAGCACCACAGTGTGTGTAGCAGCTGATCCTGATAGGCCTCTTTGGTTCCCCGGCAGCACTCCTCCGCCTTGGCTCGATGGCAGTCTCCCCGGAGACTTTGGATTTGATCCTCTAGGACTTGGATCTGACCCAGAGAGCCTAAGATGGAATGTTCAAGCAGAGCTTGTGCACTGCAGATGGGCTATGTTAGGCGCCGCCGGCATCTTCATCCCGGAATTCCTAACCAAGATTGGGATCCTAAACACACCTTCATGGTATACTGCTGGGGAGCAAGAGTACTTCACAGACACCACCACACTCTTCATAGTTGAGCTCATCTTCATCGGCTGGGCCGAGGGACGAAGATGGGCTGATATCATCAAGCCAGGCTGTGTTAACACTGACCCTATCTTCCCTAACAACAAGCTCACCGGAACTGATGTAGGGTATCCCGGCGGCCTATGGTTTGACCCTCTCGGATGGGGAAGCGGTTCACCTGAGAAGATCAAGGAGTTGAGAACAAAGGAGATCAAGAATGGAAGGTTGGCCATGTTGGCTGTCATGGGAGCATGGTTCCAGCACATTTACACCGGCACCGGCCCTATCAACAACCTCTTTGCACACCTTGCTGATCCTGGCCATGCTACTGTTTTCGCTGCTTTCACCCCCAAGTGA 816 0.5159 MASACASSAIAAVAISSPSSQKNGSQLGTTKASFLSGRKLKLNNFTAPTTGARSSTTVCVAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGSDPESLRWNVQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGEQEYFTDTTTLFIVELIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPINNLFAHLADPGHATVFAAFTPK* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0459 271 Pfam Chlorophyll A-B binding protein 75 241 IPR022796 -
Ahy12g0459 271 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 271 - -
Ahy12g0459 271 SUPERFAMILY Chlorophyll a-b binding protein 61 269 - -
Ahy12g0459 271 Gene3D Chlorophyll a/b binding protein domain 76 261 - -
Ahy12g0459 271 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 271 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0459 Ahy-Chr12 7185309 7187902 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g0459 46 271 Chloroplast and Mitochondria Gene Families AT3G61470 88.053 2.15e-151 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0459 K08908 - gmx:100802138 526.168
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0459 12 7185309 7187902 Ahy2g0412 2 5715142 5717691 hybridization