Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0445 ATGGGTCAAGAATTTTCTCACGAAGGGGTTAATAGCGAGCATACATCATATGATCAATATGAGCAGGAGGAAGAAAAACATGAGGAAATTGACGTGGATTATATGGATGAGGACGACACAAATGTGGAACCAATGTTCGATTATCACGGCTTCGATGAAGGGTATAACATTGACTCACTTGAAGACATTGGGATGATTGAATTTTGGAACATCAGAGATGAAGATGTATGTCATTTTCACTTTTCTGATGTCGACATTGCATTTGAGTTCTACAATAGATATGCAAGGACAAGAGGCTTTAGTGCTCGGAAGAACAGGACTAGGAAGAGTCGTGCGGGCGCACTTAAGTTGAAGAATTTTGTATGTCATCGTGAAGGATTTAGACCGCCAAATAATTACGGCATCGGAAACCTTAAGAGAAAACCTACACCCGAGACAAGGTGTGGCTGCAGTGCAATGATGGAGATTCGTGTAGATGCACCTAGCGGTCGTTGGTTTATTTCTTATTTTTCTGATGAACACAATCATCCGCTTCTGGATCCTCGGTTGACTGGATTGCTCCCTGGGCATAGATTCATGTCCGATGCTGATATTGGCCACATGGTTAACATGAAAAAGGGTGGGATTAGTGTTGGGCAGATATATCGGGCATTAGCAAATCAGGCAGGTGGCTACGAGTATCTCTCTTTCACGCAAAGGGACATGTATAATAAAATAGCAAAGCAGAGGCGCCAATTACCCGGTGATGCATATGCAGCTTTGAAGGCCTTGGAAATGACACATTTGATAATAACTTGGATGACCACATGA 810 0.4259 MGQEFSHEGVNSEHTSYDQYEQEEEKHEEIDVDYMDEDDTNVEPMFDYHGFDEGYNIDSLEDIGMIEFWNIRDEDVCHFHFSDVDIAFEFYNRYARTRGFSARKNRTRKSRAGALKLKNFVCHREGFRPPNNYGIGNLKRKPTPETRCGCSAMMEIRVDAPSGRWFISYFSDEHNHPLLDPRLTGLLPGHRFMSDADIGHMVNMKKGGISVGQIYRALANQAGGYEYLSFTQRDMYNKIAKQRRQLPGDAYAALKALEMTHLIITWMTT* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0445 269 MobiDBLite consensus disorder prediction 1 16 - -
Ahy12g0445 269 Pfam FAR1 DNA-binding domain 89 179 IPR004330 -
Ahy12g0445 269 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 22 202 - -
Ahy12g0445 269 MobiDBLite consensus disorder prediction 1 28 - -
Ahy12g0445 269 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 22 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0445 Ahy-Chr12 6897360 6901957 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy12g0445 FAR1 2.90E-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0445 - - ahf:112723376 517.309