Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0374 ATGGTTCAACCAAGATTGAAATCCAAAACTCTCACTAGTGGTTTAGCAACACTCTTCTTGTTCTTCTTGTTGTTGTGGCGGTGCGTGCTGTCGGATAACGAGTTAGTGGATTATGAAGCTGCTTATCTGGAGAAGCTTAGGAAGGCTATATCCCCTGCTCCCTCCAACTGGTTCACCGCCACCAACATGTGCGACTGGAGCCGTGTGATTTGCACCGACGGTGTCGACGGCCGCACCGTAGTTGACATCAACCTCAGCTCGATGTCTCTTAACGGAACGCTCCCTTCCGGTCTCAACAACTCCTTACACAACCTCAAAACTCTCAATCTCGGTCACAATTCTCTCACCGGCCCTCTCCCCTCCTTTGCTGGCCTCTCTCTCCTCCAAGAGCTACATCTGGAATCCAACAACTTCACCTCCGTCCCTCATGGCTGCTTCCAAGGTCTAAAAAGTTTGCAGCAGTTCTCCTTCACTTCCAACACCAACCTCGAACCGTGGACATTTCCCGTCGATTTGGCTGACTCCATTGAGCTCCGAATTCTCGATCTCGGCGCTACAAACCTCACTGGCTCCTTGCCAGATACATTTGATTCCTTCCCCGATTTGCAGATTCTTGAACTCTTTGATAACAACCTCACTGGCTTGTTGCCCAAGTCTCTTGCGAAACTACTCAAGCTACGATCGTTATATCTCAACGACCAAAAGTTGTCGGGTAAAATTGAATTCCTTTCATCCATGACCCAGTTGAAATATGTGTGGCTTCACGGGAACGCCTTTGAGGGTCCCATTCCTGACTTGTCAAACTGCACCAACTTGGCAGAACTTTATCTTGACAACAATCAATTAACGGGTGCAGTTCCACCTTCTCTCATCAATCTCTCGTATTTGGAGGAGGTTTTCTTGGCCAACAACTCGCTGCAGGGCCCTATGCCTGCGTTCAACAAGAATGTGAAAACAATAATTCTTGAAGGAAATGGGTTCTGTTTAAACCATCCTGGCCCTTGTGATTACAGAGTCACCACTTTGCTACAAGTTGCTGAGGCCTTTGGATATCCGTTTCAGTTGGCGCGCACGTGGCGAGGGAACGATCCCTGTAACCGTTGGAGTTTCATCACGTGCGATATCCAAGGCAAGATCAGAACCGTCAATTTGACGAACCTGAATCTCACCGGAACCATCTCGCCTGCCTTTGGCAATTTAAGCGATTTGCGAGAACTGCATCTTAGTGGGAACAATTTAAGCGGATCAATACCTGAAAGTTTGACAACTCTGTCACAACTCAAGATTCTGGATGTCTCCAACAACAACTTATCCGGGATCATTCCCACATTCTCTTCTAGCATCACGCTCAATACTACAAATAATCATGGTTTTGTTGATAGAAATTCTCCACCCAAAGCAAGTCCTCCTCATCCATCTGCACTTCCTCCCAGTCCTACTAATAGAGCAAGGCCAACCCATTACTCTATTTGTAATTATTCTTCACGTCATTGCATATACGCAGGTGCTGGTGCTGCAGGTAGTGTTGTTGGAATTATTGTAATCTTTGGAGTGATTGTTTTTAACCGTAAGAGGCGTTTAGGTTTAGTACAAAAGATAGTGTTAAGGAGAAAAAGAAAGCACGTTGATCATTATGTTGAAAATCTCATCAAAAGTTACAGTTCTCTGAGTCTTAAGCGATATTCTTATAAAGAAGTGAAAAAAATGACAAAGTTGTTTAGTGAAAAATTAGGAGAAGGAGGATATGGCATTGTGTATAAAGCAAGTTTAGCTGATGGTCAACAGGTGGCAGTAAAAATACTGAAAGAGTCAAAGGGAAGTGTGGAAGAATTTATAGATGAAGTTTTTATCATTAGCAGAACATCTCATATGAACATTGTTTCACTTTTGGGATTTTGTTATGAGAAGAATAAACGAGCATTGGTTTATGAATTCATGCACAATGACTCTTTAGATAAGTTTACTTATAAAAAAGAGTCTTCTAATGGTGTTTATAATTTGGATTGGAACACCTGGTACCAAATCTCAATTGGCATTGCTCGAGGGTTAGAATATTTGCATCAAGGATGTAATACAAAAATTTTACATCTTGATATTAAACCTCAAAATATCCTTTTAGATGAACATTTTTGCCCCAAGATTGCAGATTTTGGATTGGCTAAAATATGTAAGAAAGATCAAAGTATTGTATCTATATTAGGTACAAGAGGAACTCCAGGATACATTGCACCAGAAGTTTTTAGTCGAACATATGGTGGTGTTTCTCACAAATCTGATGTATATAGTTATGGTATGTTGATTCTTGAAATTATTGGAGGAAGACATAACTACTATGAAAGTAAAGAATCACATACCAATGAACTTTGCTTTCCAGATTGGATCTACAAAGATCTTGAGAAAGGAAATATTCCTACAAGGTGTTTGCTTGACAAAGAAGAAGAAAATGGCATGGTAATGAAAATGACTTTAGTAAGCTTATGGTGTATTCAACCAAATCCATTGGATAGGCCTTCTATGGGTAAAGTAATAGACATGTTAGAAGGATCACTTGAGTCAATACCATATCCTCCAAAACCAGTCTTATTTTCTCCTGAAAGACTTGTCTCACAATATTCAGATATATCTTATAGCAATGAACATGAGACAAGTTCAACAACAATAGAAGAAATTGACTTAGAGAAAGGGTTAATGTGA 2694 0.4094 MVQPRLKSKTLTSGLATLFLFFLLLWRCVLSDNELVDYEAAYLEKLRKAISPAPSNWFTATNMCDWSRVICTDGVDGRTVVDINLSSMSLNGTLPSGLNNSLHNLKTLNLGHNSLTGPLPSFAGLSLLQELHLESNNFTSVPHGCFQGLKSLQQFSFTSNTNLEPWTFPVDLADSIELRILDLGATNLTGSLPDTFDSFPDLQILELFDNNLTGLLPKSLAKLLKLRSLYLNDQKLSGKIEFLSSMTQLKYVWLHGNAFEGPIPDLSNCTNLAELYLDNNQLTGAVPPSLINLSYLEEVFLANNSLQGPMPAFNKNVKTIILEGNGFCLNHPGPCDYRVTTLLQVAEAFGYPFQLARTWRGNDPCNRWSFITCDIQGKIRTVNLTNLNLTGTISPAFGNLSDLRELHLSGNNLSGSIPESLTTLSQLKILDVSNNNLSGIIPTFSSSITLNTTNNHGFVDRNSPPKASPPHPSALPPSPTNRARPTHYSICNYSSRHCIYAGAGAAGSVVGIIVIFGVIVFNRKRRLGLVQKIVLRRKRKHVDHYVENLIKSYSSLSLKRYSYKEVKKMTKLFSEKLGEGGYGIVYKASLADGQQVAVKILKESKGSVEEFIDEVFIISRTSHMNIVSLLGFCYEKNKRALVYEFMHNDSLDKFTYKKESSNGVYNLDWNTWYQISIGIARGLEYLHQGCNTKILHLDIKPQNILLDEHFCPKIADFGLAKICKKDQSIVSILGTRGTPGYIAPEVFSRTYGGVSHKSDVYSYGMLILEIIGGRHNYYESKESHTNELCFPDWIYKDLEKGNIPTRCLLDKEEENGMVMKMTLVSLWCIQPNPLDRPSMGKVIDMLEGSLESIPYPPKPVLFSPERLVSQYSDISYSNEHETSSTTIEEIDLEKGLM* 898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0374 897 PANTHER RECEPTOR-LIKE KINASE TMK4 23 848 - -
Ahy12g0374 897 SUPERFAMILY L domain-like 50 328 - -
Ahy12g0374 897 ProSitePatterns Serine/Threonine protein kinases active-site signature. 694 706 IPR008271 GO:0004672|GO:0006468
Ahy12g0374 897 SUPERFAMILY L domain-like 340 446 - -
Ahy12g0374 897 SUPERFAMILY Protein kinase-like (PK-like) 548 847 IPR011009 -
Ahy12g0374 897 ProSiteProfiles Leucine-rich repeat profile. 104 126 IPR001611 GO:0005515
Ahy12g0374 897 MobiDBLite consensus disorder prediction 455 482 - -
Ahy12g0374 897 MobiDBLite consensus disorder prediction 465 479 - -
Ahy12g0374 897 ProSiteProfiles Protein kinase domain profile. 571 850 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy12g0374 897 SMART serkin_6 571 846 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy12g0374 897 ProSitePatterns Protein kinases ATP-binding region signature. 577 599 IPR017441 GO:0005524
Ahy12g0374 897 Gene3D Ribonuclease Inhibitor 337 461 IPR032675 -
Ahy12g0374 897 SMART LRR_typ_2 269 293 IPR003591 -
Ahy12g0374 897 SMART LRR_typ_2 400 423 IPR003591 -
Ahy12g0374 897 SMART LRR_typ_2 102 124 IPR003591 -
Ahy12g0374 897 SMART LRR_typ_2 199 222 IPR003591 -
Ahy12g0374 897 SMART LRR_typ_2 424 446 IPR003591 -
Ahy12g0374 897 SMART LRR_typ_2 125 148 IPR003591 -
Ahy12g0374 897 Gene3D Transferase(Phosphotransferase) domain 1 646 852 - -
Ahy12g0374 897 PANTHER OSJNBA0070M12.3 PROTEIN 23 848 - -
Ahy12g0374 897 Pfam Leucine rich repeat N-terminal domain 339 374 IPR013210 -
Ahy12g0374 897 Pfam Leucine rich repeat N-terminal domain 37 71 IPR013210 -
Ahy12g0374 897 Gene3D Phosphorylase Kinase; domain 1 545 645 - -
Ahy12g0374 897 Pfam Leucine Rich Repeat 104 124 IPR001611 GO:0005515
Ahy12g0374 897 Gene3D Ribonuclease Inhibitor 37 331 IPR032675 -
Ahy12g0374 897 Pfam Leucine rich repeat 379 437 IPR001611 GO:0005515
Ahy12g0374 897 Pfam Leucine rich repeat 177 234 IPR001611 GO:0005515
Ahy12g0374 897 Pfam Protein kinase domain 574 842 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0374 Ahy-Chr12 5358662 5362284 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g0374 558 868 Receptor kinase-like Gene Family AT5G38280 60.000 2.46e-121 381
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Ahy12g0374 Pkinase 1.50E-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0374 - - ahf:112729553 1709.12