Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0371 ATGACTATTGTAATGATAATTATCATTCTAATAATCCTGCTATTCCTGATTCGGGTTATGCTATTCAAAACAGGATTAATCCACAGCACAAAGAAATTGCAACAAACGTTACAAGAAATTTTCTACGTTCATCAGTACCTTAAAGTTCCCGAACTTAACGAGAGCATGCAACCGAACCCACTTTACAGAAAAGTCTTTCTCTATTTGCATTCTCTTCCTTCAATTGAAGATTCTGATTTCACGAACCTCGTTACCGGAACCAACCAAAACGATATCGTTTTATGCCTCGACGCAAATCAACTCATAGAGGATCATTTTCTTGGTGCAACTCTCTACTGGTTCAACCAGAAAACCGAACCGAACCGGAATAATGAGAACCGGACCGGTTCGTTTTTGCTCAAGATCAGAAAAAACGATAAGAGGAGAATTCTCGGGGCTTATCTCCGCCACATCCACGACGTCGCCGGCGACATGGAGAGCAACGGGAAACGCGAATTGAGGCTTTTCGTGAACGCCGGAGACGGCGAGGGAGGAGTTAGGTGGAGATCGGTACCGTTCACGCATCCTTCGACGTTCGAAACGATCGCGATGGGGGAAGATCTGAGGAGCAAGGTGAAATCAGATCTGGAATTGTTCCTCCGAGGGAAAAAGTATTACCGGAAGCTCGGCCGAGCTTGGAGGCGGAGCTTCTTGCTGTACGGTCCCTCCGGCACCGGAAAATCGAGCTTCGTCGCTGCTATGGCGAATTTCCTTGGATACGACGTTTACGACGTCGATCTCGAGAATGTTCGCGGTGGCGATTCAGATCTGAAGCTCCTCCTCCTGGAGACGACGCCGAAATCGATCGTCGTCGTGGAAGATCTCGACAAGTTTGTTGTCGCCGCGACGACGGAATCATCGTTGCCGGCGGCGAGCGCCACGGGGATACAGATGCTGAATATAATGGACGGGATTCTTAGCGCGTGTTGTGGAGAAGAGCGCGTGATGGTGTTCACGATGAACAGTAAGGATGGAGTCGACCCGGATCTGCTTCGTCCGGGTCGGGTCGACGTTCACATTCATTTTCCCACGTGCGATTTCTCATCGTTCAAGGAACTCGCGAGTAGCCACTTGGGTGTCAAGGAGCACAAGCTGTTCCCGCGCGTGGAGGAGATTTTGGCGCGTGGGGTGAGTCTTAGCCCGGCCGAGGTCGGCGAGTTAATGATCGCGAACCGTGGGTCACCGAGTCGGGCCATAAAATCAGTAATCGGAGCGCTAAGGCCGGATGGCGGCGATGGGATCGGACGGCGGGAAAGCGCCGATGATGACTGTGATGACGTTGACGGCGGAGATGGGTGCAATGCGGTTAAGGATTTTCGAAAATTGTATGGTTTGTTCAAATTAAGAAATGGGAAAAGATCTCGACCGTCAAATAATACATTGGTCCATGATTAG 1434 0.5014 MTIVMIIIILIILLFLIRVMLFKTGLIHSTKKLQQTLQEIFYVHQYLKVPELNESMQPNPLYRKVFLYLHSLPSIEDSDFTNLVTGTNQNDIVLCLDANQLIEDHFLGATLYWFNQKTEPNRNNENRTGSFLLKIRKNDKRRILGAYLRHIHDVAGDMESNGKRELRLFVNAGDGEGGVRWRSVPFTHPSTFETIAMGEDLRSKVKSDLELFLRGKKYYRKLGRAWRRSFLLYGPSGTGKSSFVAAMANFLGYDVYDVDLENVRGGDSDLKLLLLETTPKSIVVVEDLDKFVVAATTESSLPAASATGIQMLNIMDGILSACCGEERVMVFTMNSKDGVDPDLLRPGRVDVHIHFPTCDFSSFKELASSHLGVKEHKLFPRVEEILARGVSLSPAEVGELMIANRGSPSRAIKSVIGALRPDGGDGIGRRESADDDCDDVDGGDGCNAVKDFRKLYGLFKLRNGKRSRPSNNTLVHD* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0371 477 Pfam ATPase family associated with various cellular activities (AAA) 231 356 IPR003959 GO:0005524|GO:0016887
Ahy12g0371 477 Pfam Domain associated at C-terminal with AAA 31 114 IPR025753 -
Ahy12g0371 477 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 177 410 IPR027417 -
Ahy12g0371 477 PANTHER BCS1 AAA-TYPE ATPASE 5 433 - -
Ahy12g0371 477 SMART AAA_5 226 359 IPR003593 -
Ahy12g0371 477 CDD AAA 227 356 - -
Ahy12g0371 477 PANTHER BNAC04G00800D PROTEIN 5 433 - -
Ahy12g0371 477 Gene3D - 179 357 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0371 Ahy-Chr12 5329037 5331280 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g0371 222 406 Calmodulin-binding Proteins AT3G56690 27.179 1.27e-07 52.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0371 12 5329037 5331280 Ahy12g0371 12 5329037 5331280 ECH
Ahy12g0371 12 5329037 5331280 Ahy2g0345 2 4340035 4342077 hybridization
Ahy16g1258 16 23373499 23375553 Ahy12g0371 12 5329037 5331280 PCT
Ahy6g0168 6 2078871 2080839 Ahy12g0371 12 5329037 5331280 PCT
Ahy12g0371 12 5329037 5331280 Ahy16g1258 16 23373499 23375553 PCT
Ahy12g0371 12 5329037 5331280 Ahy6g0168 6 2078871 2080839 PCT