Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0329 ATGATGGTCAAGCGGACAGTGAGAACCGAAATGCCAAACCTGAAAAGGTGCAAGCTGGAAGAAGGAGAGGAAGCAGAGCATGATTCTGAGAGCTATGGTTGTTCCGGGAATCAGAAGAAGCGGAAGGTTAACGAATTATGCTCTCGCGATGCTGAAGATTTCAGCAGTGGTTCTGGCTCTTGGTGCAGCGAAGGAGCGTATTGGAATGGTGGTGCTGAGGTTCAGTCCAATTCAAATTCCGTACAGCTGAACGGTAAAATGGCACCGCGTGACGGCGGCGGAGATGGGACTCGGCCGCCATTGTTGCGGTCTACACGGGGCCGCCATCAGTCCTTGCCGTCGAGGTTCAATGACTCGGTTCTTGATTCATGGAAGAACCAAGGAGTCAAAGTGGAGGACACGGATTCCAGCTTTGAGGATGATGCAGAAGAAGAGAAGAAAAAGAAGGGTGATAATTATTGTCGTCTTGAAGTGAATATAGAGATGGAAAAGAATGGTTTTGTTAAAACTGAGAGTAACAGTTCTGTGCTTAGTTTTGAGGGTGGTGTGGAGCAGAAGGTTAAAACTACTGCGAATGGTGGTGAAAGGAGGAAACAGGTTTACAGGCCGGAGGATTTCGCGTTGGGTGATATAGTTTGGGCGAAGTGTGGGAAGAGGTACCCTGCTTGGCCTGCTGTGGTGATTGATCCTATCTTGCAGGCTCCGAAATCCGTCCTCAGCTGCTGCGTTCCTGGTGCACTCTGCGTCATGTTCTTTGGCTTTTCGAAAAATGGGACCCAAAGGGACTATGCTTGGGTGAAGCAGGGAATGATATTCCCTTTCTCTAAGTTCATGGAAAGATTCCAGGGTCAGACACAGTTGTACAAGAGCAAACCGAGTGACTTTCGCATGGCATTGGAGGAGGCAATGCTGGCTGTAGATGGTCTTCTCAACTCACAGCTGGAAGTAGAGGAAGTAACTTATGTAAATGCTTATCCGAATGGACATTTAGAGGCCCCAGCCATGCCTGTTGATGATGAATACCACTGCGAGGATCAAGATACAATATCTTGTGCTGGCTGTTATTTGATGTTGCCATGCAAAACGATGAAGAAGATTAAGGACCCAAGTGGTGCATCTCAATTTTATTGCAAACATTGCTTTAAGTTACGAAAATCAAAACAATATTGTGGCATTTGCAAAAAGATTTGGCACCATTCACATGGTGGGAATTGGGTGTGCTGTGATCGCTGTAATGTTTGGGTGCATGCTGAGTGCGATAAAATATCCATTGAACTTTTCAAGGATCTTGAAAACACAGATTACTATTGCCCAGCGTGCAAGGGAAATTTCAATAAGAAAGTACCCATACCCAAAACAAGCAAGTCAAAAAAGAAGTATAATGTGGAAGACAGATTGGTAGAGAATAGCCAAAAATCTATAGTACCTGAGACGGTAACAGTGGTGTGCAATGGCATGGAAGGACTCTACTTCCCAAAGCTTCATTTAATTATGTGCAAGTGTAGCTCTTGTGGTTCAAGGAAGCAGACACCAAGTGAATGGGAAAGGCACACAGGTAGCAGAGCCAAAAAATGGAAACATAGTGTGAAAGTGAAAAGCATGATGCTCCCACTAGAAAAATGGATCACAGAAAACATTTCACAAGATGGAGTTCCACAGCAGTTAGATCAGCAGCAGGTGCTTAGCTTTTTGCAAGAAAATTATGAGCCAGTTCATGCAAAATGGACAACAGAAAGATGTGCAGTTTGCAGATGGGTAGAAGATTGGGAAGATAATAAAATTATTATTTGTAACAGGTGCCAAATAGCAGTCCACCAAGAATGCTATGGGGCAAAGAATGTTCAAGATTTTACTTCTTGGGTTTGTAGAGTATGTGAAACACCAGATGTGGAGAGAGATTGTTGCCTCTGTCCTGTAAAAGGTGGTGCTCTAAAACCAACTGATGTTGAGATGCTATGGGTTCATGTGACATGTGCTTGGTTTCAACCTCAAGTGGTTTTCCAAAATCATGAGGCCATGGAACCTGCGGTAGGAATACTGAGAATTCCTCCTAATACCTTTGTTAAGTTGCATTCTGTGGAGAAGAATGGGACTCAAATAACAAAGAAGCTAATATACTGTGCAGTTCACAGGGTCCCAAATCCAGAATCTGTATTGGTTGTACATACTCCCCTGGGGGTTTTCTCTCCCAGAGCCTCTCTTGAAAATCATAGAAGATGCTTCCGGGGGTCAAGGCTGGTTTCATCAAAGAATGTAGAGCTTATTCAATCTTCAAACTCTGAAGGTGACAAGATTGAGCCATTTTCTGCTGCAAGATGTCATGTATACCGTAGATCACTGAATAAGAAGGCTGAAATACCAATAATTCACTTGCTGAAGGGACCCGGCCATCATTCTTTAAGTGCAATAACTCAGTTGAACAGCCATAAGGATGCTGAAGATTCTAAAGTATTTACTTCTTTCAAGGAACGACTTCATCATTTACAGAAAATGGAAAAGCTTCGAATTTGCTTTGGAAAATCGGGTATCCATGGATGGGGTCTTTTTGCTCGTAGAGATATACAAGAAGGAGAGATGGTTGTTGAGTATCGCGGTGAGCGGGTAAGGCGAAGTGTTGCTGATTTAAGGGAAGTGAAATACCGTGCAGAAGGAAAAGATTGCTATCTGTTCAAGATCAGCGAGGATGTGGTAATTGATGCAACGTACAAGGGCAATATAGCACGGCTAATAAACCATTCTTGCATGCCAAATTGCTATGCAAGGATTATGAGTTTGGGTGATCAAGAGAGTCGGATCGTTCTCATTGCCAAGACGAATGTTTCTGCTGGCGAAGAATTAACGTATGATTACTTATTCGATCCAGATGAGCAGGATGAACTGAAAGTTCCCTGCCTTTGCAAAGCCTCCAATTGTAGGAAATTTATGAACTAG 2931 0.4357 MMVKRTVRTEMPNLKRCKLEEGEEAEHDSESYGCSGNQKKRKVNELCSRDAEDFSSGSGSWCSEGAYWNGGAEVQSNSNSVQLNGKMAPRDGGGDGTRPPLLRSTRGRHQSLPSRFNDSVLDSWKNQGVKVEDTDSSFEDDAEEEKKKKGDNYCRLEVNIEMEKNGFVKTESNSSVLSFEGGVEQKVKTTANGGERRKQVYRPEDFALGDIVWAKCGKRYPAWPAVVIDPILQAPKSVLSCCVPGALCVMFFGFSKNGTQRDYAWVKQGMIFPFSKFMERFQGQTQLYKSKPSDFRMALEEAMLAVDGLLNSQLEVEEVTYVNAYPNGHLEAPAMPVDDEYHCEDQDTISCAGCYLMLPCKTMKKIKDPSGASQFYCKHCFKLRKSKQYCGICKKIWHHSHGGNWVCCDRCNVWVHAECDKISIELFKDLENTDYYCPACKGNFNKKVPIPKTSKSKKKYNVEDRLVENSQKSIVPETVTVVCNGMEGLYFPKLHLIMCKCSSCGSRKQTPSEWERHTGSRAKKWKHSVKVKSMMLPLEKWITENISQDGVPQQLDQQQVLSFLQENYEPVHAKWTTERCAVCRWVEDWEDNKIIICNRCQIAVHQECYGAKNVQDFTSWVCRVCETPDVERDCCLCPVKGGALKPTDVEMLWVHVTCAWFQPQVVFQNHEAMEPAVGILRIPPNTFVKLHSVEKNGTQITKKLIYCAVHRVPNPESVLVVHTPLGVFSPRASLENHRRCFRGSRLVSSKNVELIQSSNSEGDKIEPFSAARCHVYRRSLNKKAEIPIIHLLKGPGHHSLSAITQLNSHKDAEDSKVFTSFKERLHHLQKMEKLRICFGKSGIHGWGLFARRDIQEGEMVVEYRGERVRRSVADLREVKYRAEGKDCYLFKISEDVVIDATYKGNIARLINHSCMPNCYARIMSLGDQESRIVLIAKTNVSAGEELTYDYLFDPDEQDELKVPCLCKASNCRKFMN* 977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0329 976 Gene3D SET domain 801 976 IPR046341 -
Ahy12g0329 976 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 381 447 IPR013083 -
Ahy12g0329 976 CDD PHD_TCF19_like 390 440 - -
Ahy12g0329 976 Pfam SAND domain 477 544 IPR000770 GO:0003677
Ahy12g0329 976 Pfam PHD-finger 592 626 - -
Ahy12g0329 976 CDD SET_SETD1-like 823 972 - -
Ahy12g0329 976 Pfam PHD-finger 389 441 IPR019787 -
Ahy12g0329 976 SMART PWWP_4 206 275 IPR000313 -
Ahy12g0329 976 SUPERFAMILY SET domain 827 973 IPR046341 -
Ahy12g0329 976 SUPERFAMILY FYVE/PHD zinc finger 387 449 IPR011011 -
Ahy12g0329 976 ProSiteProfiles SET domain profile. 834 951 IPR001214 GO:0005515
Ahy12g0329 976 SMART set_7 834 957 IPR001214 GO:0005515
Ahy12g0329 976 Pfam PWWP domain 209 305 IPR000313 -
Ahy12g0329 976 ProSiteProfiles Post-SET domain profile. 960 976 IPR003616 -
Ahy12g0329 976 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 689 976 - -
Ahy12g0329 976 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 1 689 - -
Ahy12g0329 976 ProSiteProfiles Zinc finger PHD-type profile. 387 443 IPR019787 -
Ahy12g0329 976 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 568 630 IPR013083 -
Ahy12g0329 976 MobiDBLite consensus disorder prediction 18 37 - -
Ahy12g0329 976 SMART PostSET_3 960 976 IPR003616 -
Ahy12g0329 976 Pfam PHD-zinc-finger like domain 633 686 - -
Ahy12g0329 976 ProSiteProfiles PWWP domain profile. 208 277 IPR000313 -
Ahy12g0329 976 MobiDBLite consensus disorder prediction 82 119 - -
Ahy12g0329 976 PANTHER PHD FINGER PROTEINS 689 976 - -
Ahy12g0329 976 PANTHER PHD FINGER PROTEINS 1 689 - -
Ahy12g0329 976 SUPERFAMILY SAND domain-like 477 537 IPR010919 -
Ahy12g0329 976 ProSiteProfiles Zinc finger PHD-type profile. 577 628 IPR019787 -
Ahy12g0329 976 Gene3D - 171 315 - -
Ahy12g0329 976 MobiDBLite consensus disorder prediction 18 35 - -
Ahy12g0329 976 Pfam SET domain 845 950 IPR001214 GO:0005515
Ahy12g0329 976 Gene3D - 471 556 IPR010919 -
Ahy12g0329 976 ProSiteProfiles Extended PHD (ePHD) domain profile. 631 685 IPR034732 -
Ahy12g0329 976 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 2 976 IPR025780 -
Ahy12g0329 976 CDD PHD_ATX3_4_5_like 579 625 IPR042011 -
Ahy12g0329 976 SUPERFAMILY FYVE/PHD zinc finger 577 642 IPR011011 -
Ahy12g0329 976 SUPERFAMILY Tudor/PWWP/MBT 200 313 - -
Ahy12g0329 976 ProSitePatterns Zinc finger PHD-type signature. 580 625 IPR019786 -
Ahy12g0329 976 SMART PHD_3 389 441 IPR001965 -
Ahy12g0329 976 SMART PHD_3 579 626 IPR001965 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0329 Ahy-Chr12 4730519 4737875 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g0329 845 976 C2H2 Transcription Factor Family AT2G23740 37.584 1.54e-16 83.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Ahy12g0329 SET 2.00E-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0329 - - gmx:100793624 1457.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0329 12 4730519 4737875 Ahy12g0329 12 4730519 4737875 ECH