Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0326 ATGTCCCTGAAGAAAGGCAAAAATGACGACAGGAGGAGTGCTCAGCTCAAAGGAAAAGTGAAGCCGAGTAGCCCCTCAGCAAGCTGGCTTAAAGTGACGGTGGCCTTCGACTTGTGGATCGGTGATAACGGCGGAGGTTGGAATGGAAGTGGAGGCTGTGAGGATGTTGGAAGCATGTTGGATAGTAGATGTGGTGGTAAAGTAAGGGTTTTTGATATAATAATGGCATCAAGTAGCAAGTTTTGCAAGGATGCGTGTATGTGGAATGAGCCTCTTGTGGACAACTGGATGGAGGGCAATGCTGGTGTGTCGAATCCACAGAATGCATTCCACATAATGGCAGCTGGTAGCATAATGTTTGTCTTCTTATTTCAGGACACAATGTATGATACCAGAGTGGAGGAAGATGCTGAGTCATCCGATTGGGAAGGTAGGGGGGCTTCAATGTTGCCCGTTTTTTTGGGTTTGGATGGGTTGCGAGCTGAAGATGTTCTTGAAATGGAGTTCTCTTCACCTCAGGAGGCTAGCGGCTTCTATAACAATTACAGCCGACTAAAGGGCTTTGCATCAAGGCGAGGCAAGACGGTTAGAAACACTGCCGGAGAGATAGTGCGGTACACGTTTGTTTGTAATAGGCAAGGATTTCGAGAGAAGAAATGGTTGGAAAAGGTTGATCGCAAAAGGGAGCATAAGGCTGTAACCCGATGTGGATGTTTGGCGGAGATGAGGATAAAGAGGAAAGAGGGTAGTGGGAGGTGGTATGTGTCGCGTTTTGTCGAGGAGCATAACCACGAACTTGCGTATGGGAAGCTTGTTGATTATCTGCGGTCACACAGGAAGATATCTGAGGTAGAAGTTGCTCAGCTAACAAGCATGAGAGAGATTGGGATTAGCATACCTAAGATTTATGAGTCCTTCGCAGCACAACTAGGGGGTTTTAACCTGGTAACATTCACAAAGCAAGATATGTATAATGAGATACGGAAACAGAGAGGTCTGCAAGGCGGAGACGTAAGTGCAGCTGTTAGGTACTTGGAAGGTCTGGCACGCATGGATGGGAAAATGTTTTGGCGCTACAAGTTGGGATCAGGGCAACACCTATGCAACTTGTTTTGGAGCGATGGTCGTTGTCAGGAAGATTATGCGATATTCGGCGATGTGCTAGCATTCGACGCTACCTATGGCCGCAACAAGTACAACCTACCTGTTGTAGTATTTTCCGGAGTAAACCACCACAACCAGACATGCGTATTCGGAACAGCAATGGTGTCATGCGAATCGCAGGAGTCATATATTTGGGTTCTTCGCCAGTTTCTGGAATGCATGCAAGGTAAGGCACCGCAATCAGTCATCACGGATGGCGACCCGGCCATGCGTATAGCAATCCGCACCGTTTTTCCTGACGCACATCATCGGTTGTGTGCCTGGCATCTGCTGAGGAACTCGACTGCTAACATAAGCGACCCGAGATTCACACAAATGTTTAGATACTGCATGCTGGCAGATATGGAAATCGAAGAGTTCGAAGCGTATTGGGAGTCAATGGTCAATGAGTGCGGTGTCAGGGAGGTTGAGTGGGTTAAGGACTTGTACACCAAAAAGCACGCTTGGGCAACCGCATACATTCGTGGTAGATTTTTTGCTAGAGTACGGACAACCTCTAGGTGCGAGTCACTACACGCCAAACTAGGGAGGTTTGTTGAGAGCAGGTACGGGGTGTTAGAATTTGTCAGAAATTTTCAAAGGTGTGTGGATTTTCTGCGTGACACCGAGGATGAGCTAGACTTTCGTTCATGGTACGGAACACCTGTGCTACAAACGGAGTTCGTTGAGCTGGAAAAGTCTGGATGGACTATGTTCACCCGCGAAATGTTTCTCAGATACCGGGATAGCCTGAAACGGTGTGTTCGTGTTAGAATATGTGAATTTGATGACAGTGACAACCCTCATGCATATACTCTTCAGAAGTATCGGAGGCCTGAGATGAATTGGAAGGTTTATAGGGACCATATCTCGAACAGATTTACTTGCAGCTGCATGCGCATGGAGTCGTTTGGCATTCCTTGTGTGCATATCCTTTCCGTTTGTGTAAGGCTAGACTTGGTGGAAATCCCTGAAAGCCTGGTGCTGCGTAGGTGGTCTAAGGCAGCCAAATTGGAGATACATAACCAATGTGGTGAGCAACACACTGCTGAACCAAGTGTGACCTATAGGACACGATTGGGTGCTTTCTCCCAGCTGTGCAAGCGTTTAGGGCGCGTTGCTTGCATGAGCGATGAAGACTTCAAGGTTTACTCAAACAAGCTTATGAGCGATGCTCTGTTCCTTGAAATAAAGTACGGCTTAAGACCATTAACGGATAATATGACAACAGCAAATGACTGCGGGGTGAAGGACCCCATTCGTGTCAGGACAAAAGGCACGGCTCGGATGAGTCAAGCAGGCGGTTCTGCGCCGAAAACGAAAAGAAAGTGCAGCACATGCGGGAAGCTCGGGCACCGGAGGACTAGATGCCCCATCGGAGGCGCGCAACCTTCAACGAGGAACAAAGAATCACTTGCTGGCAGAAATAAACGCAAGCGAACGAAGGCACCCGTCGTTGTCCCAGATAATTGTCCGCCTGAAAATGCATGTCAAGCTGGATGCGACTTATGGGAACAATTTTCGCTTGCAGACCCCTGA 2682 0.4806 MSLKKGKNDDRRSAQLKGKVKPSSPSASWLKVTVAFDLWIGDNGGGWNGSGGCEDVGSMLDSRCGGKVRVFDIIMASSSKFCKDACMWNEPLVDNWMEGNAGVSNPQNAFHIMAAGSIMFVFLFQDTMYDTRVEEDAESSDWEGRGASMLPVFLGLDGLRAEDVLEMEFSSPQEASGFYNNYSRLKGFASRRGKTVRNTAGEIVRYTFVCNRQGFREKKWLEKVDRKREHKAVTRCGCLAEMRIKRKEGSGRWYVSRFVEEHNHELAYGKLVDYLRSHRKISEVEVAQLTSMREIGISIPKIYESFAAQLGGFNLVTFTKQDMYNEIRKQRGLQGGDVSAAVRYLEGLARMDGKMFWRYKLGSGQHLCNLFWSDGRCQEDYAIFGDVLAFDATYGRNKYNLPVVVFSGVNHHNQTCVFGTAMVSCESQESYIWVLRQFLECMQGKAPQSVITDGDPAMRIAIRTVFPDAHHRLCAWHLLRNSTANISDPRFTQMFRYCMLADMEIEEFEAYWESMVNECGVREVEWVKDLYTKKHAWATAYIRGRFFARVRTTSRCESLHAKLGRFVESRYGVLEFVRNFQRCVDFLRDTEDELDFRSWYGTPVLQTEFVELEKSGWTMFTREMFLRYRDSLKRCVRVRICEFDDSDNPHAYTLQKYRRPEMNWKVYRDHISNRFTCSCMRMESFGIPCVHILSVCVRLDLVEIPESLVLRRWSKAAKLEIHNQCGEQHTAEPSVTYRTRLGAFSQLCKRLGRVACMSDEDFKVYSNKLMSDALFLEIKYGLRPLTDNMTTANDCGVKDPIRVRTKGTARMSQAGGSAPKTKRKCSTCGKLGHRRTRCPIGGAQPSTRNKESLAGRNKRKRTKAPVVVPDNCPPENACQAGCDLWEQFSLADP* 894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0326 893 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 163 737 IPR031052 GO:0006355
Ahy12g0326 893 SMART 26again6 675 702 IPR006564 GO:0008270
Ahy12g0326 893 MobiDBLite consensus disorder prediction 1 25 - -
Ahy12g0326 893 PANTHER OS02G0262500 PROTEIN 163 737 - -
Ahy12g0326 893 SUPERFAMILY Retrovirus zinc finger-like domains 805 839 IPR036875 GO:0003676|GO:0008270
Ahy12g0326 893 Pfam MULE transposase domain 387 481 IPR018289 -
Ahy12g0326 893 MobiDBLite consensus disorder prediction 1 17 - -
Ahy12g0326 893 Pfam FAR1 DNA-binding domain 178 267 IPR004330 -
Ahy12g0326 893 MobiDBLite consensus disorder prediction 839 865 - -
Ahy12g0326 893 ProSiteProfiles Zinc finger CCHC-type profile. 823 839 IPR001878 GO:0003676|GO:0008270
Ahy12g0326 893 Pfam SWIM zinc finger 676 697 IPR007527 GO:0008270
Ahy12g0326 893 ProSiteProfiles Zinc finger SWIM-type profile. 667 700 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0326 Ahy-Chr12 4704102 4708536 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy12g0326 MULE 1.00E-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0326 - - aip:107611673 1538.09