Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0323 ATGGCTGCAAAGGAACAGAAGTTTGAAAGGCTTGAGGATTTGAGATCAGATTCATCTGTGAGTATTGAGAAGAATGATTCAGCTAGTCATGAATTCAACAAAAGATTGGTTACTAAGAGAAAAGTTCTTAATCCACATGAGCCACTACTTCAGAAATGGAACAAAATATTTGTGATCACATGTGTCATGGCAATCTTTGTGGACCCTCTTTTCTTTTACATCTCAGTTATCAATGACAAGGGAAAATGCCTCAAATTGGATGAAACACTGAAGATCACCACATGTGTCCTTCGCACATTCTTTGATCTTTTATATGTTCTTCGTATCATCTTTCAGTTTAGAACTGGGTTTATTGCCCCTTCTTCTCGAGTGTTCGGAAGGGGTGAGTTAATTGATGACAGTATTGCTATAATGAAAAGATACTTAACTTCAAATTTCATCATTGACATTCTATCAATTATTCCACTTCCACAGGTATCTGCCTCTTCTACTCATTCACTAATCCTTAAGTTAGCAATGCGTGTGTTTTTGTATATCATTAGTTACCTTCAGAGGAAAACATTTTACATTTTTACTATAACAAGTACCATGGAATCCAAAATATATGAAGGCATCAGGAACAATATTTTGCAGTTTAGCTTGATGTGA 648 0.3534 MAAKEQKFERLEDLRSDSSVSIEKNDSASHEFNKRLVTKRKVLNPHEPLLQKWNKIFVITCVMAIFVDPLFFYISVINDKGKCLKLDETLKITTCVLRTFFDLLYVLRIIFQFRTGFIAPSSRVFGRGELIDDSIAIMKRYLTSNFIIDILSIIPLPQVSASSTHSLILKLAMRVFLYIISYLQRKTFYIFTITSTMESKIYEGIRNNILQFSLM* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0323 215 Pfam Ion transport protein 53 176 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Ahy12g0323 215 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 9 160 - -
Ahy12g0323 215 SUPERFAMILY Voltage-gated potassium channels 45 197 - -
Ahy12g0323 215 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL-LIKE PROTEIN 9 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0323 Ahy-Chr12 4661714 4663633 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g0323 24 159 Ion Channels AT5G53130 56.618 9.72e-51 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0323 K05391 - ahf:112726495 419.468