Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0320 ATGGGATACTTTCCACAATCATCATCACTTTCGGACATGAAATCAATCTTTGTTGAAAACTCGGATGAGAATAATGAAGAATCCGCTGTTTGTTCTTATGAATCTTGGCTAGAAAATCATCCTAATGCATTGGAAAACTTTGAAGAAATATTGAGCATTGCTAATAAAGGGAAAGAGATTGTTTTGTTTTTGGATTATGATGGAACACTATCACCAATTGTGGAAGATCCTGATCAAGCTCATATAAGTGATGCCATGCGCACCGCCGTACGTGAAGTTGCTTTTCATTTTCCGACGGCCATTATCAGCGGAAGACAGAGAAATAAGGTATATGAATTTGTAAAGTTAAGGAATGTGTATTATGCTGGAAGTCATGGCATGGATATATCCACTCCATTAGGCTCTTCAAATAATCAAAATCAGAAGCATCAAACAAAGGTTATTGATGAAAATGGTAATCAGTTTGTTAACTTCCTTCCAGCAAAAGAATATTTGTCAACTATCCAAGAGATAATTGAGGTTCTAAGGAAAAATATTGCAACAATAAAAGATTCTACTATTGAAGATAATTTGTACTGTATTAGTGTACACTACCGACGTGTCAAGAGGGAAGAGGATGTTGGTGTCCTCAAAGAGATTGTGGAGTCCATTATGAAAGCTTACCCAGATTTTCAAATATCAGGAGGAAGAAAGGTTATGGAGATACGGCCAAAGATAAATTGGGATAAAGGTCGTGCACTATTGTATTTGTTAGATACTCTTGGCTTTGACAACTTTAACCATGTTCTTCCAATTTACATAGGGGATGACAAAACAGATGAAGATGCTTTTAAGGTTATAGTTGAGAAAGGGGAAGGTTTTCCAATAATAGTTTCTTCGGTTGCTAAAGAGACCATGGCTTCTTTTTCTCTGCGTGACCCTTCTCATGTTATGACCTTCTTGATACGTTTAGCAAAATGGAAAAGGAACTACTCATCATTCATCACCAAAACCAAACAAAGTTGA 1005 0.3632 MGYFPQSSSLSDMKSIFVENSDENNEESAVCSYESWLENHPNALENFEEILSIANKGKEIVLFLDYDGTLSPIVEDPDQAHISDAMRTAVREVAFHFPTAIISGRQRNKVYEFVKLRNVYYAGSHGMDISTPLGSSNNQNQKHQTKVIDENGNQFVNFLPAKEYLSTIQEIIEVLRKNIATIKDSTIEDNLYCISVHYRRVKREEDVGVLKEIVESIMKAYPDFQISGGRKVMEIRPKINWDKGRALLYLLDTLGFDNFNHVLPIYIGDDKTDEDAFKVIVEKGEGFPIIVSSVAKETMASFSLRDPSHVMTFLIRLAKWKRNYSSFITKTKQS* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0320 334 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 62 280 IPR006379 -
Ahy12g0320 334 SUPERFAMILY HAD-like 61 323 IPR036412 -
Ahy12g0320 334 Gene3D - 173 332 IPR023214 -
Ahy12g0320 334 Gene3D - 60 149 IPR023214 -
Ahy12g0320 334 Pfam Trehalose-phosphatase 63 308 IPR003337 GO:0003824|GO:0005992
Ahy12g0320 334 TIGRFAM T6PP: trehalose-phosphatase 58 318 IPR003337 GO:0003824|GO:0005992
Ahy12g0320 334 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 13 325 - -
Ahy12g0320 334 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 13 325 IPR044651 GO:0004805|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0320 Ahy-Chr12 4566138 4574969 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g0320 46 314 Trehalose Biosynthesis Gene Families AT1G60140 23.741 5.64e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0320 K01087 - gmx:100799466 427.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0320 12 4566138 4574969 Ahy12g0320 12 4566138 4574969 ECH