Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0310 ATGTCTGAAGTTGTTTCTGGTGTGGCATCAACACTCTTGGCCAATTTAGCAACAAAATCATTCCAAGAGATTACTCTGGCATGTGGTCTTAAAGATGATGTAAAAAAGTTTGAAAGTTCTTTGAGAACCATCAATGCATATCTCATAGATGCTGAGAACAAGCAAGCAATAAACCGCAGTATAGATGAGTGGTTGAAGCAACTCAGAGAGGCATTTGATGATGCTGGTGACATATTAGATGAAATAGAGTATGAAGCAAAACTTAATGAAGTGGTCAAAATGTATGGAAGCACTAGCACGGAGGTTCGCCGATTCTTCTCATACACAAGTAATCCACTTGCATTTCGCATCAGGATGGCCCACAAAATCAAAGATATGAAACAGAAAATGGATGAAAAAATAAGAGAAGGGAGAAAGTTGGGTATAGTTGAACATGTCAACACTCCAGCTATGGAGCACAATTTACCATGGCGAGAAACTGCTTCTTCATTGTCTTTCCGTGTGTGTGGTAGACGTGAAGAAAAAGAAAAGATTATAAATTCATTGATGACACAAAAATCACAAGCTAATGGTATTGATGTGATCTCAGTTGTTGGGATTGGAGGTTTGGGAAAGACTACACTTGCACAGATGGTTTACAATGATACCCAAGTGAATGAGCATTTCGATACATTAATGTGGGTTTGTGTTTCTGATGATTTTGATGTGAAGAAGCTAATACAAAGAATCATTCATGCGGCCTCAAAGAGAGAGAATGTGGTGGATGCAAATTCTAGTTTGGAATATATGATATCTCTTCTCAATCAAACGTTACATGGTAAGAAATTCTTACTCGTGTTAGACGATGTTTGGAATGAAAACCACAACAAATGGGATGAATTGAGAAATCACTTGTTAGAAGTAGGTGGTGACAAAGGCAGCAAAATTCTAGTGACCACTCGTAGTAGAAAAGTTGCTGACATTGTGGGGAGTAATCTTGTAATGAAATTAGAAGGACTTCCTGAGAATGAATGTTGGCGGCTCTTTGCAAAATGTGCATTCCAAGAAGAGAAGGACGAAGAGAAGTACCCAAGGCTAAAGCAAATTGGGGAGCAAATTGTTAAAAGATGCAAAGGAGTACCCTTGGCTATAACAACTTTGGGTTGCTTGCTTAGATCAAAATGCCATGATGAAAATGAGTGGAGAAAAATAAGGGATAGTGAGGTGTGGAATCTCGATCAAGAAGAAACTGACATTTTGCCATCACTCAAATTGAGTTACAATCACTTGCCACCACAACTAAAGCAATGTTTTTCATACTGCTCTTGTTTTCCAAAAGATTATGAATATGTGGCTATTGAGTTGATTATGTTGTGGATGGCTCATGGACTCCTCCAACCTACACGCGAAGAGGAAGATGCAGAAGATATTGGAGAGTTATATATTAAAAAGCTTGTTTCAACATCTTTACTTCAAATTGATGAAGAAGATTCTTTCTACTTTCCCAAGATTCGAAATTCGATGGCATTTAAAAATCTCAAAATGCATGATCTTGTACATGATCTTGCAAAATTAACAATGAAAGAGTCAAGCAGAACAAGAACCGTTGTGCAAGAGGGGCAACAAGAAGCATCGATAGAATGGACCTCCGACAAGTTCAACTATCTGAGAGTGTTGCACCTAACAAAAGATACGGAATTGAGCTCGTTTCCTGATGATTGCTTTGCCAGAATGAAGAAGCACTTGAGATATCTCTATCTTGGAAATTGTGCTAGTTTGAAAAAGCTAACTGATTCCATTTGTAAGCTGCAAAGTTTGCAGAGTTTGCGCCTTTATTGTGACAGCCTTGAAGAACTTCCCAAAAACATGAACAAACTCATCTATCTACAATATTTGCTTTTGGCGGATATCAAAATTACAAGTTTGTCTTCAATGAATATAGGGCGCTTCCAACAACTCAAATTCTTGTATCTTTTCAAATGTTCAAGGTTAGTGTACGTACCAAGTGCTGTTGGTCGCTTGACTACTTTAAAGAAGCTGGTCTTTCTTTTTTGTAATAAGCTGGTGTATTTTGAGGATGAAGAGGAAGAAGGAAAGCAACATGTGTTGGTAAATAATTTAAACCTTCAATTATTCTCAATCACTGGATCAAATAACCTGGATGCTTTACCAAAATGGCTTGAAAGAGCTACTAAATTGCAATATTTGAGTATAAGCATGTCAGGGATAAAATCATTGCCCACAAGGTTGCCGATGACCTCCCTTGAAGAACTTGATATCTATTGGTGTAAAGAATTGTCATCTCTTCCCAACATGGATCAAACTCATAATCTTCAATATTTACAGATATCTTATTGTCCCAAATTATATGTAAGGTACAATAAGGAGACAGGTTCAGATTGGCCCAAAATTGCTCATATTCCATATTGCAAGATCTTGGCACCTCTGATCTTACCTTTTGACTATCTTGGGAGATCATGA 2460 0.3756 MSEVVSGVASTLLANLATKSFQEITLACGLKDDVKKFESSLRTINAYLIDAENKQAINRSIDEWLKQLREAFDDAGDILDEIEYEAKLNEVVKMYGSTSTEVRRFFSYTSNPLAFRIRMAHKIKDMKQKMDEKIREGRKLGIVEHVNTPAMEHNLPWRETASSLSFRVCGRREEKEKIINSLMTQKSQANGIDVISVVGIGGLGKTTLAQMVYNDTQVNEHFDTLMWVCVSDDFDVKKLIQRIIHAASKRENVVDANSSLEYMISLLNQTLHGKKFLLVLDDVWNENHNKWDELRNHLLEVGGDKGSKILVTTRSRKVADIVGSNLVMKLEGLPENECWRLFAKCAFQEEKDEEKYPRLKQIGEQIVKRCKGVPLAITTLGCLLRSKCHDENEWRKIRDSEVWNLDQEETDILPSLKLSYNHLPPQLKQCFSYCSCFPKDYEYVAIELIMLWMAHGLLQPTREEEDAEDIGELYIKKLVSTSLLQIDEEDSFYFPKIRNSMAFKNLKMHDLVHDLAKLTMKESSRTRTVVQEGQQEASIEWTSDKFNYLRVLHLTKDTELSSFPDDCFARMKKHLRYLYLGNCASLKKLTDSICKLQSLQSLRLYCDSLEELPKNMNKLIYLQYLLLADIKITSLSSMNIGRFQQLKFLYLFKCSRLVYVPSAVGRLTTLKKLVFLFCNKLVYFEDEEEEGKQHVLVNNLNLQLFSITGSNNLDALPKWLERATKLQYLSISMSGIKSLPTRLPMTSLEELDIYWCKELSSLPNMDQTHNLQYLQISYCPKLYVRYNKETGSDWPKIAHIPYCKILAPLILPFDYLGRS* 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0310 819 CDD RX-CC_like 7 132 IPR038005 -
Ahy12g0310 819 Gene3D - 332 419 IPR042197 -
Ahy12g0310 819 Pfam Rx N-terminal domain 9 90 IPR041118 -
Ahy12g0310 819 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 434 IPR027417 -
Ahy12g0310 819 PANTHER OS08G0543100 PROTEIN 5 782 - -
Ahy12g0310 819 SUPERFAMILY L domain-like 507 782 - -
Ahy12g0310 819 Gene3D - 153 327 IPR027417 -
Ahy12g0310 819 PRINTS Disease resistance protein signature 270 284 - -
Ahy12g0310 819 PRINTS Disease resistance protein signature 743 759 - -
Ahy12g0310 819 PRINTS Disease resistance protein signature 370 384 - -
Ahy12g0310 819 PRINTS Disease resistance protein signature 194 209 - -
Ahy12g0310 819 Gene3D - 8 124 - -
Ahy12g0310 819 Gene3D Ribonuclease Inhibitor 691 802 IPR032675 -
Ahy12g0310 819 Gene3D Ribonuclease Inhibitor 516 690 IPR032675 -
Ahy12g0310 819 PANTHER DISEASE RESISTANCE PROTEIN RP 5 782 IPR044974 GO:0006952
Ahy12g0310 819 Pfam NB-ARC domain 173 420 IPR002182 GO:0043531
Ahy12g0310 819 Gene3D - 420 515 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0310 Ahy-Chr12 4417521 4427431 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g0310 174 525 WRKY Transcription Factor Family AT5G45050 24.523 1.02e-11 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0310 - - adu:107473015 1315.83