Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0309 ATGAGCTGTTCTTTCATGTTCTTTGGCTTTAATCCCACTTCAGCAACGTCAGGAGTTGTTTCTGGTGTGGCATCAACACTCTTGGCCAATTTAGCAACAAAATCATTCCAAGAGATTACTCTGGCATGTGGTCTTAAAGATGATGTAAAAAAGTTTGAAAGTTCTTTGAGAACCATCAAAGCATATCTCATAAATGCTGAGAACAAGCAAGCAAAAAACCGCAGTATAGATGAATGGTTGAAGCAACTCAGAGAGGCATTGGATGATGCTGGTGACATATTAGATGAAATAGAGTATGAAGCAAAACTTAATGAAGTGGTCAAAATGTATGGAAGCACTAGCACGGAGGTTTGCCGATTCTTCTCGTACACAAGTAATCCACTTGCATTTCGCATCAGGATGGCCCACAAAATCAAAGATATGAAACAGAAGATGGATGGAAAAATAAGAGAAGGGAGAAAGTTGGGTATAGTTGAACAACATGTCAACACTCCATCTATGGAGCACAATTTACCATGGCGAGAAACTGCTTCTTCATTGCCTTTCCGTGTCTGTGGTAGACGTGAAGAAAAAGAAAAGATTATAAATTCATTGATGACACAAAAATCACAAGCTAATAATATTGATGTGATCTCAGTTGTTGGGATTGGAGGTTTGGGAAAGACTACACTTGCACAAATGGTTTACAATGATACCCAAGTGAAGGCGAATTTCGATACATTAATGTGGGTTTGTGTTTCTGATGATTTTGACGTGAAGAAGCTAATACAAAGAATCATTCATGCGGCCTCAAAGAGAGAGAATGTGGTGGATGCAAATTCTAGTTTGGAATATATGATATCTCTTCTCAATCAAACGTTACATGGTAAGAAATTCTTACTCGTGTTAGACGATGTTTGGAATGAAAACCACAACAAATGGGATGAATTGAGAAATCACTTGTTAGAAGTAGGTGGTGACAAAGGCAGCAAAATTATAGTAACCACTCGTAGCAGAAAAGTTGCTGACATTGTGGAGAGTAATCTTGTAATGAAATTAAAAGGACTTCCTGAGAATGAATGTTGGCAGCTCTTTACAAAATGTGCATTCCAAGAAGAGAAGGACGAAGAGAAGTACCCAAGGTTAAAGCAAATTGGGGAGCAAATTGTTCAAAAATGCAAAGGGGTGCCCTTAGCTATAACAACTTTGGGTTGCTTGCTTAGATCAAAATGCCATGATGAAAATGAATGGAGAAAAATAAGGGATAGTGAGGTGTGGAATCTCAATCAAGAAGAAACTGATATTTTGCCATCACTCAAATTGAGTTACAATCACTTGCCACCAGAAGTAAAGCAATGTTTTTCATACTGCTCTTGTTTTCCAAAGGATTATGAATACATGGCAATTGAGTTGATTATGTTCTGGATGGCTCATGGACTCCTCCAACCTACACGTGAAGAGGAAGATGCAGAAGATATTGGGGAGTTGTATATTAAGAAGCTTGTTTCAACTTCTTTACTTCAAATTGAAGAAGGATATCCTTACCACTACTTTGATTTCCAAAATTTAATAACATTTAAAAGATTCAAAATGCATGATCTTGTACATGATGTTGCACAATTAACAATGAAAGAGTCGAGCAAGACAAGAACCGTTATGCAAGAGGGGCAACAAGAAGCATCGATAGAATGGACCTCCGACAAGTTCAACTATCTGAGGGTGTTGCACCTAACAAAATATATGGAATCAAGCTCGTTGCCTGATGATTGCTTTGCCACAATGAAGAAGCACTTGAGATATTTGCATTTGCAAGCTGGAAATTGTCGTAATTTGAAAAAGCTCCCTGATTCCATTTGCAAGCTGCAAAATCTGCAAAGTTTGAGCCTTCGTGGTTTTGACGGCCTCCAAAAGCTTTGCAAAAACATGAAAAATCTCATCTATCTTCAATATTTGCATTTAGAGATGGAAATTACAAGTTTGTCCTCAATGAACATAGGGCGCTTCCAACAACTCAAATTCTTGTATCTTTACAACTGTTCAAAGTTAGTGTCTGTACCAAGTGTTGTTGGTCGCTTGACTACTTTAAAGAAGCTGGGTTTTATTTTTTGTGAAGAGCTGGTGAATTTTGAGGATGAAGAGGAAGAAGAAAAGCAACATGTGAATTTAAACCTTCAAGTATTCTTTATCGATGGATTAGAAAAGTTGGATGCTTTACCAAAATGGCTTGAAAGAGCTACTAAATTGCAATATTTGAGAATAAGGACAACAGGGATTAAATCATTGCCCACAAGGTTGCCGATGACCTCTCTTGAAGAATTTTATATTGTTGCCTGTGAAGAATTGTCATCTCTTCCTAACATGGATCAAACTCATAATCTTCAATATTTAAAGATATCTTATTGTCCTGAATTATATACAAGGTACAATAAGAATACAGGACCAGATTGGCCTAAAATTGCTCATATCCCACAATGCGAGATTGCTCTGCATGCATATTGA 2478 0.3733 MSCSFMFFGFNPTSATSGVVSGVASTLLANLATKSFQEITLACGLKDDVKKFESSLRTIKAYLINAENKQAKNRSIDEWLKQLREALDDAGDILDEIEYEAKLNEVVKMYGSTSTEVCRFFSYTSNPLAFRIRMAHKIKDMKQKMDGKIREGRKLGIVEQHVNTPSMEHNLPWRETASSLPFRVCGRREEKEKIINSLMTQKSQANNIDVISVVGIGGLGKTTLAQMVYNDTQVKANFDTLMWVCVSDDFDVKKLIQRIIHAASKRENVVDANSSLEYMISLLNQTLHGKKFLLVLDDVWNENHNKWDELRNHLLEVGGDKGSKIIVTTRSRKVADIVESNLVMKLKGLPENECWQLFTKCAFQEEKDEEKYPRLKQIGEQIVQKCKGVPLAITTLGCLLRSKCHDENEWRKIRDSEVWNLNQEETDILPSLKLSYNHLPPEVKQCFSYCSCFPKDYEYMAIELIMFWMAHGLLQPTREEEDAEDIGELYIKKLVSTSLLQIEEGYPYHYFDFQNLITFKRFKMHDLVHDVAQLTMKESSKTRTVMQEGQQEASIEWTSDKFNYLRVLHLTKYMESSSLPDDCFATMKKHLRYLHLQAGNCRNLKKLPDSICKLQNLQSLSLRGFDGLQKLCKNMKNLIYLQYLHLEMEITSLSSMNIGRFQQLKFLYLYNCSKLVSVPSVVGRLTTLKKLGFIFCEELVNFEDEEEEEKQHVNLNLQVFFIDGLEKLDALPKWLERATKLQYLRIRTTGIKSLPTRLPMTSLEEFYIVACEELSSLPNMDQTHNLQYLKISYCPELYTRYNKNTGPDWPKIAHIPQCEIALHAY* 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0309 825 PANTHER DISEASE RESISTANCE PROTEIN RP 22 799 IPR044974 GO:0006952
Ahy12g0309 825 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 170 450 IPR027417 -
Ahy12g0309 825 Coils Coil 80 100 - -
Ahy12g0309 825 PRINTS Disease resistance protein signature 386 400 - -
Ahy12g0309 825 PRINTS Disease resistance protein signature 210 225 - -
Ahy12g0309 825 PRINTS Disease resistance protein signature 659 675 - -
Ahy12g0309 825 PRINTS Disease resistance protein signature 286 300 - -
Ahy12g0309 825 CDD RX-CC_like 22 146 IPR038005 -
Ahy12g0309 825 Gene3D - 436 529 IPR036388 -
Ahy12g0309 825 Pfam NB-ARC domain 189 437 IPR002182 GO:0043531
Ahy12g0309 825 Gene3D - 23 139 - -
Ahy12g0309 825 Gene3D - 348 435 IPR042197 -
Ahy12g0309 825 SUPERFAMILY L domain-like 518 796 - -
Ahy12g0309 825 Pfam Rx N-terminal domain 24 105 IPR041118 -
Ahy12g0309 825 Gene3D - 170 344 IPR027417 -
Ahy12g0309 825 Gene3D Ribonuclease Inhibitor 530 817 IPR032675 -
Ahy12g0309 825 PANTHER OS08G0543100 PROTEIN 22 799 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0309 Ahy-Chr12 4406508 4413292 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g0309 190 799 WRKY Transcription Factor Family AT5G45050 24.309 2.41e-16 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0309 - - adu:107473015 1333.93