Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0308 ATGGCTGAAGTTGTTTCTGGTGTGGCATCAACACTCTTAGGCAATTTAGCAACAAAATCTTTTCAAGAGATTGCTCTGGCATGCGGTCTTAAAGATGATGTAAAAAAGTTTGAAAGTTCTTTGAGAACCATCAAAGCATATCTCATAGATGCTGAGAACAAGCAAGCAAAAAACCGCAGTATAGATGAGTGGTTGAAGCAACTCAGAGAGGCATTTGATGATGCTGGTGACATATTAGATGAAATAGAGTATGAAGCAAAACTTAATGAAGTGGTCAAAATGTATGGAAGCATTAGCACGAAGGTTCGCCGATTCTTCTCATACACAAGTAATCCACTTGTATTTCGCATCAAAATGGCCCACAAAATCAAAGATATGAAACAGAAGATGGATGAAAAAATAAGAGAAGGGAGAGACTTGGGTATAGTTGAACAACATGTCAACACTCCAGCTCTGGAGCACAATTTACCATGGCGAGAGACTGCTTCTTCATTGCCTTTCCGTGTGTGTGGTAGACTTGAAGAGAAAGAGGAGATTATAAAGTCATTGATGACACAAAAATCAGAAGCTAATAGTATTGATGTGATCTCAATTGTTGGGATTGGTGGTTTGGGAAAGACTACACTTGCACAAATGGCTTACAATGATACCCCAGTGAAGGCGAATTTCGATCCCTTAATGTGGGTGTGTGTATCTGATGATTTTGATGTCAAGAAGCTAATACAAAGAATCATTCATGCAGCCACAAAGAGAGAGAATTTCGTGGATGCAAATTTTAGTTTGGAATATATGATATCTCTTCTCAATCAAACGTTGCATGGTAAAAAATTCTTACTCGTGTTAGACGATGTTTGGAATGAAAACCACAGCAAATGGGATGAATTGAGAAATCACTTGTTAGAAGCAGGTGGTGACAAAGGCAGCAAAATTATAGTGACCACTCGTAGCAGAAAAGTTGCTGACATTATGGGGAGTAATCTTGTAATGAAATTGGAAGGACTTCCTGAGAATGAATGTTGGCGGCTCTTTGCAAAATGTGCATTCCAAGAAGAGAAGGACGAAGAGAAGTACCCAAGGCTAAAGCAAATTGGGGAGCAAATTGTTAAAAAATGCAAAGGAGTACCCTTGGCTATAACAACTTTGGGTTGCTTGCTTAGATCAAAATCACATGATGAAAATGAGTGGAGAAAAATAAGGGATAGTGAGGTGTGGAATCTCGATCAAGAAGAAACTGACATTTTGCCATCACTCAAATTGAGTTACAATCACTTGCCATCAGAAGTAAAACAATGTTTTTCATACTGCTCTTGTTTTTCAAAGGATTACGAATATGTTGCTATTGATTTGATTATGTTGTGGATGGCTCATGGACTCCTCCAACCTACACGCGAAGAGGAAGATGCAGAAGATATTGGGGAGTTGTATATTAAGAAGCTTGTTTCAGCATCTTTACTTCAAATTGAAGGAGATTCTAACCCCTACTTTGATTTCAAAAATTTAATGACATTTAAAATACTCAAAATGCATGATCTTGTACATGATCTTGCACAATTAACAATGAAAGAGTCAAGCAGGACAAGAACCGTTATGCAAGAGGGGCAACAAGAAGCATTGATAGAATGGACCTCCGACAAGTTCAACTATCTGAGGGTGTTGCACCTAACAAAATATATGGAATTGAGCTCGTTGCCTGATGATTGCTTTGCCATAATGAAGAAGCACTTGAGATATCTCTTTCTTAGAAATTGTCCTAGTTTGAAAAAGCTTCCTGATTCCATTTGTAAGCTGCAAAGTTTGCAGAGTTTGGGCCTTGGTTGTGACAGCCTTCAAGAACTTCCCAAAAACATGAACAAACTCATCTATCTACAATATTTGTTTTTGATGGGCATCAAAATTACAAGTTTGTCTTCAATGAATATAGGGCGCTTCCAACAACTCAAATGCTTGTATCTTTTGAAATGTTCAAGGTTAGTGTCCGTACCAAGTGCTGTTGGTCGCTTGACTACTTTAAAGAAGTTGGGATTTTATGAGTGTGAAGAGCTGGTGAATTTTGAAGATGAAGAGGAAGAAGGAAAGCAACATGTGGTAATAAATAATTTAAACCTTCAATTATTCTCAATCATTGGGTCTGCGAAGTTGGATGCTTTACCAAAATGGCTTGAAAGAGCTACTAAATTGCGACATTTGAGTATAATGTTAACAGGGATAAAATCATTGCCCACAAGGTTGCCGATGACCTCTCTTGAAGAACTTTATATCCTTCTATGTGCAGAATTATCATCTCTTCCTAACATGGATCAAGCTCATAATCTTCAGTATTTAGAGATATATTATTGTCCCACATTATATGCAAAGTACAATAAAGAGACAGGTCCAGATTGGCCCAAAATTGCTCATATTCCATATTGCAAGGTGGAGATGCCGTGA 2427 0.3787 MAEVVSGVASTLLGNLATKSFQEIALACGLKDDVKKFESSLRTIKAYLIDAENKQAKNRSIDEWLKQLREAFDDAGDILDEIEYEAKLNEVVKMYGSISTKVRRFFSYTSNPLVFRIKMAHKIKDMKQKMDEKIREGRDLGIVEQHVNTPALEHNLPWRETASSLPFRVCGRLEEKEEIIKSLMTQKSEANSIDVISIVGIGGLGKTTLAQMAYNDTPVKANFDPLMWVCVSDDFDVKKLIQRIIHAATKRENFVDANFSLEYMISLLNQTLHGKKFLLVLDDVWNENHSKWDELRNHLLEAGGDKGSKIIVTTRSRKVADIMGSNLVMKLEGLPENECWRLFAKCAFQEEKDEEKYPRLKQIGEQIVKKCKGVPLAITTLGCLLRSKSHDENEWRKIRDSEVWNLDQEETDILPSLKLSYNHLPSEVKQCFSYCSCFSKDYEYVAIDLIMLWMAHGLLQPTREEEDAEDIGELYIKKLVSASLLQIEGDSNPYFDFKNLMTFKILKMHDLVHDLAQLTMKESSRTRTVMQEGQQEALIEWTSDKFNYLRVLHLTKYMELSSLPDDCFAIMKKHLRYLFLRNCPSLKKLPDSICKLQSLQSLGLGCDSLQELPKNMNKLIYLQYLFLMGIKITSLSSMNIGRFQQLKCLYLLKCSRLVSVPSAVGRLTTLKKLGFYECEELVNFEDEEEEGKQHVVINNLNLQLFSIIGSAKLDALPKWLERATKLRHLSIMLTGIKSLPTRLPMTSLEELYILLCAELSSLPNMDQAHNLQYLEIYYCPTLYAKYNKETGPDWPKIAHIPYCKVEMP* 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0308 808 CDD RX-CC_like 7 132 IPR038005 -
Ahy12g0308 808 PRINTS Disease resistance protein signature 195 210 - -
Ahy12g0308 808 PRINTS Disease resistance protein signature 641 657 - -
Ahy12g0308 808 PRINTS Disease resistance protein signature 271 285 - -
Ahy12g0308 808 PRINTS Disease resistance protein signature 371 385 - -
Ahy12g0308 808 Gene3D Ribonuclease Inhibitor 518 693 IPR032675 -
Ahy12g0308 808 Gene3D Ribonuclease Inhibitor 694 791 IPR032675 -
Ahy12g0308 808 Gene3D - 333 420 IPR042197 -
Ahy12g0308 808 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 435 IPR027417 -
Ahy12g0308 808 PANTHER DISEASE RESISTANCE PROTEIN RP 5 783 IPR044974 GO:0006952
Ahy12g0308 808 Gene3D - 421 517 IPR036388 -
Ahy12g0308 808 PANTHER OS08G0543100 PROTEIN 5 783 - -
Ahy12g0308 808 Gene3D - 9 124 - -
Ahy12g0308 808 Gene3D - 157 329 IPR027417 -
Ahy12g0308 808 Pfam NB-ARC domain 175 421 IPR002182 GO:0043531
Ahy12g0308 808 Pfam Rx N-terminal domain 9 90 IPR041118 -
Ahy12g0308 808 Coils Coil 173 193 - -
Ahy12g0308 808 SUPERFAMILY L domain-like 507 779 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0308 Ahy-Chr12 4378656 4398705 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g0308 193 527 WRKY Transcription Factor Family AT5G45050 24.638 5.95e-11 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0308 - - aip:107623432 1333.55