Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0260 ATGGCTGAAGCACTTGTTGTTGGAGCTTTAGTATCTGGCTCCATTAGCCTTGTTCTTAACAGGCTCATTTCACCTGAGTTTGTCAACTCGGTGGTGAGCAAGAAGCTGGACCGAAAGTTGGTTGAGAGGCTCAAGACTGCTCTCTTGGCTGCAAAAGCTCTGGCCGCTGACGCCGAGCAGAAGCAGTTTGGAAACGATAGTGTGAGGAAATGGCTTGATAGTCTCAGGGATGCTCTCTACACTGCTGATGACTTGTTGGACCGTGCCTTAATCAAAGCTGAAATTCGCAAGAAGGTACGCCTTCGCCTTCCTCTCCGCCTTAATTTATCTGCTAGGGAGATGGTGACTAAGATAAACGAGGTGCTTAAAACAATAGAAGATCTTCAGAAACTTAAAGATAGCCTTGGTCTGAAAGAGATTCCAACGGGTAGCTCCTCATGGAGAACTCCATCCACTTCTCTTGAAAGCGGGACTGTCTATGGCAGGGATGATGACAAACAGGCATTAATCAAGATGCTAAATGACAACAATGATCATAACTTGTCCGTCATCTCTATTGTTGGTATGGGCGGGGTTGGTAAAACAACTTTAGCACAATGGCTGTACAACAATAAGGATTTGATGGACGGGGTTGATCTGAAAGTATGGATTTGTGTTTCTGAAAATTTTGATGTTGTTGAGACTACTAAGAATGTTATAAAGGGGATCAATGCAGGTGTTTGTAGTCTTGAAAGCTTTGATTTACTTCAACAAGATTTGAAGGAAAGACTGTCAGAAAAGAAGTTCTTCATTGTTTTGGACGATGTTTGGAGTGAAGATGTTGACAAGTGGAATAGTTTTGTCACCCCTTTTCAACATGGGAGAAAAGGAGGCACGATTCTTGTAACTACCCGCAAGGAAAATGTTGGTCGAGTAGTCCAACACTATAACTCCTACACTCTCAAGGAACTGTCAGACGACTATTGTTGGTCTATTTTTGCGGACAATGCATCCTTTCCTGAATCAAATGGGAGCTCGGAACTGGAAGGAATAGGTAGAAAGATTGTCGAGAGGTGTGATGGCTTGCCGTTAGCTGCAGAAACACTTGGACGCTTGTTGCGGTCAAAGCATGATGCTGGGGAATGGAATAAAGTACTATCTAGTGATATTTGGCAATTTTCTATGACAGACAGTAAGATCGTTCCTGCGTTGTTAATAAGTTACTATCATCTGCCTGCTCATTTAAAACGTTGCTTTGTTTATTGTTCGTTGTATCCCAAAGATCATGAATTTGATAAAGGTGAATTAATCTTGTTGTGGATGGCTGAAGATTTTTTACGACCACCAAGGACAGGAGAGACTTTAGAAGAAGTCGGTTGCGAGTGTTTTGATCACTTGGCTTCAAGACTATTTTTCAAGCGGGTCCAATATAATGAAAAGTATTTTGTGATGCATGATCTCATGCATGACTTGGCAACTTTTCTTGCTGGAGATCTTTGTTGTAGATTTGGTGAAAAAGAAGAGATGAGTATTCTAACTCGGCATTTGTCATACAATCATTCAATCCCTGAGAAAATATGCTCCTCTAGTAAAAGTGAATCTTTGAGGACATTATTGTATATCAATCATGGAGGTCGTTTCTGGAAAGCACGCGCAACATTACCATGTGACATATTGTCAAAGAATAAATACTTGAGAGTTTTGTCCTTTGGTACACTCAATATATTTCCTGATTCAATAGCTAAAAAATTGATCCAATTGCGCTATCTGGATCTCTCTTGCAGTGCTGTTAAGATATTGCCCGAGTCATTATGCAACATGTGCAATCTACAAACTTTGAAGTTAGAAGGCTGTTCAAAGCTGACTATGCTGCCCAATGGCATGAATACTCTTCTCCCAAATTTACAGTATCTTGACATACGAGGTTGCCCAAACATTTGTAGGTTGCCAGAGGGAGGTTTGCCACCTAACCTGAAAGAGCTTAGGGTAGGAAAATGTGAGGAACAAGTGAGGGGTCTATCATGGTTGGGCAACTTGGACAACCTCCCTCATCTTTTCATTGATGGTTCTAACTGTCCAAACCCAGAGGTGGGTTGGCTGCCTCGCCTTCCCTCCCTTACCACTCTTCGGATATGGGGGTTCGATTATCTGCAGACATTGGACTGCAACGAGCTTCTCTGCCTCACCTCCCTCCAACAACTACACATTTCAGACTGTCCAAACCTGAAGAATATGGAAGGAGAAAAGCTGCCTTCCTCCCTCCAACAATTACACATTTCAGGGTGTCATAAGCTGGAGAATATTGCAGGAGAAAAACTGCCTCCCTCTCTCTTACTACTTCAAATTTATGGCTGTCATTTCCTGGGCGAACACTGCAAGAACAAGCATCAACAAATTTGGTCCAAAATTTCCCACATCCCCACCATTCAAGTCAATGGCATACAAATTCTCTGA 2433 0.4225 MAEALVVGALVSGSISLVLNRLISPEFVNSVVSKKLDRKLVERLKTALLAAKALAADAEQKQFGNDSVRKWLDSLRDALYTADDLLDRALIKAEIRKKVRLRLPLRLNLSAREMVTKINEVLKTIEDLQKLKDSLGLKEIPTGSSSWRTPSTSLESGTVYGRDDDKQALIKMLNDNNDHNLSVISIVGMGGVGKTTLAQWLYNNKDLMDGVDLKVWICVSENFDVVETTKNVIKGINAGVCSLESFDLLQQDLKERLSEKKFFIVLDDVWSEDVDKWNSFVTPFQHGRKGGTILVTTRKENVGRVVQHYNSYTLKELSDDYCWSIFADNASFPESNGSSELEGIGRKIVERCDGLPLAAETLGRLLRSKHDAGEWNKVLSSDIWQFSMTDSKIVPALLISYYHLPAHLKRCFVYCSLYPKDHEFDKGELILLWMAEDFLRPPRTGETLEEVGCECFDHLASRLFFKRVQYNEKYFVMHDLMHDLATFLAGDLCCRFGEKEEMSILTRHLSYNHSIPEKICSSSKSESLRTLLYINHGGRFWKARATLPCDILSKNKYLRVLSFGTLNIFPDSIAKKLIQLRYLDLSCSAVKILPESLCNMCNLQTLKLEGCSKLTMLPNGMNTLLPNLQYLDIRGCPNICRLPEGGLPPNLKELRVGKCEEQVRGLSWLGNLDNLPHLFIDGSNCPNPEVGWLPRLPSLTTLRIWGFDYLQTLDCNELLCLTSLQQLHISDCPNLKNMEGEKLPSSLQQLHISGCHKLENIAGEKLPPSLLLLQIYGCHFLGEHCKNKHQQIWSKISHIPTIQVNGIQIL* 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0260 810 Coils Coil 41 61 - -
Ahy12g0260 810 Gene3D - 316 399 IPR042197 -
Ahy12g0260 810 Gene3D Ribonuclease Inhibitor 541 801 IPR032675 -
Ahy12g0260 810 Gene3D - 150 312 IPR027417 -
Ahy12g0260 810 Coils Coil 111 131 - -
Ahy12g0260 810 Pfam NB-ARC domain 163 380 IPR002182 GO:0043531
Ahy12g0260 810 Gene3D - 15 131 - -
Ahy12g0260 810 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 415 IPR027417 -
Ahy12g0260 810 Gene3D - 400 487 IPR036388 -
Ahy12g0260 810 SUPERFAMILY L domain-like 476 796 - -
Ahy12g0260 810 PANTHER OS05G0414200 PROTEIN 30 654 - -
Ahy12g0260 810 Pfam Rx N-terminal domain 35 97 IPR041118 -
Ahy12g0260 810 PANTHER DISEASE RESISTANCE PROTEIN RP 30 654 IPR044974 GO:0006952
Ahy12g0260 810 PRINTS Disease resistance protein signature 598 614 - -
Ahy12g0260 810 PRINTS Disease resistance protein signature 183 198 - -
Ahy12g0260 810 PRINTS Disease resistance protein signature 352 366 - -
Ahy12g0260 810 PRINTS Disease resistance protein signature 256 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0260 Ahy-Chr12 3811362 3815573 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g0260 171 778 WRKY Transcription Factor Family AT5G45050 22.411 5.94e-12 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0260 - - ahf:112733081 1342.41