Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0210 ATGGCTGAAGCACTTGTTGTTGGAGCTCTAGTTTCTGGCTTCGCCAACGTTGTCCTTGACAGGCTCATTTCATCTGAGTTTGTCAACTTGGTGGTGGGCAAGAAGCTGAACCGGAAGTTGGTGGAGAGGCTCAAGACTGCTATCTTGGCTGCCAAAGCTCTGGCTGCTGACGCTGAGCAGAAGCAGTTTGGAAACGAACTCGTCAGAGAATGGCTTGATAATCTCAAGGATGCTCTCTACACTGCTGATGACCTGCTGGACCGTGTCTTCATCAAAGCTCAAATTCGCAGTAAGGTACGCACTCGGCTTCCTCACTTCCTTGATCTGTCTGGTAGGAAGATGGTGACTAAGATAGAAGAGGTGGTTGAAAGAATAGTAGATCTTGAGAAACGCAAAGATACCCTTGGTCTGAAAGAGATTCCAACGGGTAGCTCCTCATCATGGAGGCCTCCATCCACTTCTCTTGTGAAGGGGAATGTGTACGGCAGGGATGGTGACCAACAGGCATTAATCAAGATGCTACATGACAACAATGATCATCACTTGTCCGTCATCTCTATTGTTGGTATGGGCGGGGTTGGTAAAACAACTTTAGCACAATGGCTCTACAACAATGAGGATTTGATGAAGGGAATGTCGTCAAGGGGATCAATTCAGGTGTTTGTAGTCTTGACAGCTTTGATTTACTTCAACAAGATTAAGGAAAAGCTGTCAGAAAAGAAGTTCTTCATTGTTTTGGACGATGTTTGGAGTGAAGATGTTGACAAGTGGAATAGTTTTGTCACCTCTTTTCAACATGGGAGAAAAGGAAGCACTATTCTTCTAACTACCCGCAAGGAAAATGTTGGTCCAATAGCCCAAAATTATAATGCTTACTTTCTTGAGGGACTGTCAGATGATTATTGTTGGTCTATATTTGCGGACAATGCATCCTTTCTAGAATCTAATTGGAGTTCAGAATTGGAAGGAATAGGTAGAAAGATTGTCAAGAAGTGTGATGGCTTGCCGTTAGCTGCAGAAACACTTGGACGCTTGTTGCGCTCAAAGCATGATGTTAAGGAGTGGAATAAAATTTTACTGAGTGACATTTGGGAATTTCCCATGACGGACAGTAAGGTTGTTCCTGCATTGTTAATAAGTTATTATCATCTACCTGCACACTTAAAACGCTGCTTTGTCTATTGTTCATTGTATCCCAAAGATCATCAATATGATAAAGATGAATTAATTTTGTTATGGATGGCCGAAGATCTTTTACGACCACCAAAGAGGAGAGAAACTTTAGAAGAAGTTGGTTGCGAGTGTTTTGATGACTTGGCTTCAAGACTTTTTTTCAAGCAGGTCGAGGGTAATGATGAGAAGTATTTTGTGATGCATGATCTCATGCATGACTTGGCAACTTTTCTTGCTGGAGAGTTTTATTGTAGATTATCCGAAGAACTCGATGAAAAGGAAGAGATGAGGATTCTAACTCGTCATCTGTCATACAATCATTCAATCTCTCAAAATACTTCTTATAAAATAGAATCTCTGAGGACATTGTTGTATATCAATCATAGTCCTTTTTCAATCCGGAAAGAAGGCACAGCGTTACCATATGGCATATTGTCAAAGAAAAATACCTAA 1626 0.4133 MAEALVVGALVSGFANVVLDRLISSEFVNLVVGKKLNRKLVERLKTAILAAKALAADAEQKQFGNELVREWLDNLKDALYTADDLLDRVFIKAQIRSKVRTRLPHFLDLSGRKMVTKIEEVVERIVDLEKRKDTLGLKEIPTGSSSSWRPPSTSLVKGNVYGRDGDQQALIKMLHDNNDHHLSVISIVGMGGVGKTTLAQWLYNNEDLMKGMSSRGSIQVFVVLTALIYFNKIKEKLSEKKFFIVLDDVWSEDVDKWNSFVTSFQHGRKGSTILLTTRKENVGPIAQNYNAYFLEGLSDDYCWSIFADNASFLESNWSSELEGIGRKIVKKCDGLPLAAETLGRLLRSKHDVKEWNKILLSDIWEFPMTDSKVVPALLISYYHLPAHLKRCFVYCSLYPKDHQYDKDELILLWMAEDLLRPPKRRETLEEVGCECFDDLASRLFFKQVEGNDEKYFVMHDLMHDLATFLAGEFYCRLSEELDEKEEMRILTRHLSYNHSISQNTSYKIESLRTLLYINHSPFSIRKEGTALPYGILSKKNT* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0210 541 Gene3D - 380 468 IPR036388 -
Ahy12g0210 541 Coils Coil 41 61 - -
Ahy12g0210 541 PRINTS Disease resistance protein signature 184 199 - -
Ahy12g0210 541 PRINTS Disease resistance protein signature 332 346 - -
Ahy12g0210 541 Coils Coil 118 138 - -
Ahy12g0210 541 Gene3D - 296 379 IPR042197 -
Ahy12g0210 541 PANTHER OS05G0414200 PROTEIN 26 514 - -
Ahy12g0210 541 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 395 IPR027417 -
Ahy12g0210 541 Gene3D - 17 131 - -
Ahy12g0210 541 Pfam NB-ARC domain 167 222 IPR002182 GO:0043531
Ahy12g0210 541 Pfam NB-ARC domain 231 358 IPR002182 GO:0043531
Ahy12g0210 541 Gene3D - 153 224 IPR027417 -
Ahy12g0210 541 Gene3D - 225 290 IPR027417 -
Ahy12g0210 541 Pfam Rx N-terminal domain 37 97 IPR041118 -
Ahy12g0210 541 PANTHER DISEASE RESISTANCE PROTEIN RP 26 514 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0210 Ahy-Chr12 3275291 3276977 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g0210 182 349 WRKY Transcription Factor Family AT5G45050 25.654 3.98e-09 57.8