Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0192 ATGGCTGAAGAACAGGAGAGCACTGTGACCAGCCAGGAGTCGTTGATCGAGAAGATCGCCGATAAGATTAAAGGCCACGATTCTTCATCATCGTCCGATTCCGATTCCGATTCCGAGAAAACCGCAGCTTCGTCAATTAAGGAGAAGGTGTTTCGCCTCTTCGGTAGAGAGAGGCCTGTTCACTCCGTCCTCGGCGGCGGAAAGCCTGCTGATGTGCTATTATGGAGGAACAAGAAGATATCCGGTGGTGTGCTTGGAGGAGCCACTGCTGTTTGGGTCTTCTTTGAATTGCTTGAATATAACCTTCTCACTCTTGTTTGTCACATTTTGATCCTGTTGCTTGCTGGTTTGTTCTTGTGGTCCAATGCTCAGACGTTCATCTACAAGAAGGAGCCTCACATCCCACATGTTCATATTCCAGAAGAACCATTCCTGCAAGTTGCATCTGCATTGAGAATTGAAATCAACGCTGGATTTTCTGCCTTGCGTAACATTGGTGCTGGAAAGGATTTGAAGAAATTCCTAATTGTTATTGCTGGCTTGTGGGTTTTATCTATTATTGGTAGCTGGTGCAATTTCCTGACCTTGTTCTACATAACTTTTGTTTTGTTGCACACCGTCCCTGTTGTGTATGATAAGTACGAAGATAAGATAGACCCCTTGGCTGAAAAGGGTTTCATTGAGTTTAAAAAGCAATATGCTGTGTTTGATGAAAAGGTGTTAAGTAAGATCCCTAAAGGTCCGTTGAAGGCCAAGAAGTTAGCCTAG 768 0.444 MAEEQESTVTSQESLIEKIADKIKGHDSSSSSDSDSDSEKTAASSIKEKVFRLFGRERPVHSVLGGGKPADVLLWRNKKISGGVLGGATAVWVFFELLEYNLLTLVCHILILLLAGLFLWSNAQTFIYKKEPHIPHVHIPEEPFLQVASALRIEINAGFSALRNIGAGKDLKKFLIVIAGLWVLSIIGSWCNFLTLFYITFVLLHTVPVVYDKYEDKIDPLAEKGFIEFKKQYAVFDEKVLSKIPKGPLKAKKLA* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0192 255 ProSiteProfiles Reticulon domain profile. 69 255 IPR003388 -
Ahy12g0192 255 PANTHER RETICULON 1 253 IPR045064 GO:0009617
Ahy12g0192 255 PANTHER RETICULON-LIKE PROTEIN 1 253 - -
Ahy12g0192 255 MobiDBLite consensus disorder prediction 21 40 - -
Ahy12g0192 255 Pfam Reticulon 70 224 IPR003388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0192 Ahy-Chr12 3143916 3146536 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0192 - - gmx:100779788 365.925
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0192 12 3143916 3146536 Ahy17g2696 17 124530916 124533603 ECH
Ahy12g0192 12 3143916 3146536 Ahy19g3591 19 158518560 158520156 ECH
Ahy12g0192 12 3143916 3146536 Ahy12g0192 12 3143916 3146536 ECH
Ahy12g0192 12 3143916 3146536 Ahy2g0223 2 2550271 2552738 hybridization
Ahy14g2609 14 133248432 133257282 Ahy12g0192 12 3143916 3146536 PCT
Ahy4g2281 4 119231603 119240496 Ahy12g0192 12 3143916 3146536 PCT