Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0188 ATGGAAAACCAAGATCCTTCACCACCACAATTGTTGCTACCACCACCACAACAAGATCATCATCACTCTCATAATGATAATAATATTCATGACGAGTCTCAATATAATCCATTGTTCTTCTTGCCACCACCACCTTCTCCTTCTTCCTCCATCATGATGATGCAAAACCCTTTGGTGCAAGAAAATATTGATTGGGTTAGTTTCCTCTCTAATGGAGAAAACAACAACTTGTTTATTGGAGATAATCATAATACCAATAAAGAAACAACAATGGAATGTGCTTCTTCTTTTTATGCTTCTACTTCTACCTCTACTACTTCTATGCCGTCTCTGATGACTGAGGTTCATCAGAGCGGCGAGGACGAGAAAAAGAAAGGAGGAAGATTGATGAAGAAGAAGACGAAGCCGAGGTTTGCATTTCAAACAAGAAGTGTGGATGATATTCTTGATGATGGTTACCGATGGAGAAAATATGGACAGAAAGCTGTGAAGAACAGCATGTATCCAAGAAGCTACTACCGGTGCACTCATCATACATGCAATGTGAAGAAACAAGTTCAAAGGTTGTCCAAAGACACAAGCATAGTGGTGACAACTTATGAGGGAATTCATAATCACCCATGTGAGAAGCTCATGGAAACCCTAACTCCTCTTCTCAAGCAAATGCAATTTCTAGCTAGCTTCTAA 687 0.3959 MENQDPSPPQLLLPPPQQDHHHSHNDNNIHDESQYNPLFFLPPPPSPSSSIMMMQNPLVQENIDWVSFLSNGENNNLFIGDNHNTNKETTMECASSFYASTSTSTTSMPSLMTEVHQSGEDEKKKGGRLMKKKTKPRFAFQTRSVDDILDDGYRWRKYGQKAVKNSMYPRSYYRCTHHTCNVKKQVQRLSKDTSIVVTTYEGIHNHPCEKLMETLTPLLKQMQFLASF* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0188 228 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 35 224 IPR044810 GO:0003700
Ahy12g0188 228 Gene3D WRKY domain 133 208 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy12g0188 228 PANTHER WRKY TRANSCRIPTION FACTOR 43-RELATED 35 224 - -
Ahy12g0188 228 ProSiteProfiles WRKY domain profile. 144 209 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy12g0188 228 SMART WRKY_cls 149 208 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy12g0188 228 MobiDBLite consensus disorder prediction 1 43 - -
Ahy12g0188 228 SUPERFAMILY WRKY DNA-binding domain 144 208 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy12g0188 228 Pfam WRKY DNA -binding domain 150 207 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0188 Ahy-Chr12 3118349 3120471 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g0188 109 228 WRKY Transcription Factor Family AT5G41570 68.852 6.04e-57 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Ahy12g0188 WRKY 2.40E-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0188 - - gmx:100810669 214.927
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0188 12 3118349 3120471 Ahy2g0216 2 2495858 2498586 hybridization