Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0169 ATGTCAGTCTACGACGCAGCATTCGTAGAAACACAGCTCTCAAAGCGCACTTCCATCTTCGGCCTCCGTCTATGGGTCCTCATCGGAATCCTCGTCGGCGCTCTCATCGTCTTCTCCCTCTTCCTCCTCTCTCTCTGCTTCACCTCCCGCCGCAACCGCCGCCACCGCCGCAACCACAAGCCTCTCACTCCTCTCGTCTCCAAGGAAATCCAGGAAATCATTTCCACTCCTCCCAATCCTCAACCGCATGAACTCCACCTCGACATCGGAAAAGCTGCGGCGGCGGAGCAGCACCGCAGGGTGGTGTCTGCTGTGGCTTTCTCAAGCGGAGAAAGCAAAGGCGGCGGCGGCGGCGGCGGCGGAGGAGGAGGAGGAGGAGGAGGAGGAAGCGTGTGCGAAACGACGTCGTCGTTTGGGAGTGGAAGCGTATCGGCGGGACCAGAGGTTTCGCATCTTGGTTGGGGGAAGTGGTTTACGCTGAGGGAAATGGAGGATGCGACTGGAGGAATGTGTGAGGAGAATGTGATCGGTGAAGGTGGCTATGGAATCGTGTACCGTGGTGTTCTCTCTGATGGTACCAATGTTGCTGTTAAGAATCTCTTGAATAACAAGGGACAAGCTGAGAGAGAATTTAGGGTAGAGGTAGAAGCTATTGGTCGTGTGCGGCACAAGAATCTTGTTAGATTGCTTGGATACTGTGTTGAGGGCGCATACAGGATGCTTGTGTATGAATATGTTGACAACGGAAATCTGGACGAGTGGCTGCATGGGGATGTTGATTCTGTAAGCCCTCTGACTTGGGATATCCGGATGAACATCATCTTGGGAACGGCAAAAGGATTGGCTTATCTTCATGAGGGGCTCGAACCAAAAGTTGTCCACCGAGACGTGAAATCAAGCAATATACTCCTTGATCGCCAATGGAACCCAAAGGTTTCTGACTTTGGGCTCGCTAAGCTTCTCTGTTCTGATCATAGCTATGTCACAACCCGAGTGATGGGGACATTTGGTTATGTTGCACCGGAGTATGCATGCACTGGAATGCTGACTGAGAAGAGTGATGTTTATAGCTTTGGGATACTTATTATGGAAATAATTACCGGAAGAAGTCCCGTTGATTATAGTAAACCCCAAGGAGAGGTTAATTTAATTGAGTGGTTGAAAACTATGGTTGGCAATAGAAAATCAGAGGAACTCATTGATCCGAACCTTCCTGAAAAGCCGTCTTCAAAGGCTCTTAAGCTTGCTCTGTTGGTTGCTCTTAAATGTGTTGATCCTGATGCCACAAAGAGACCTAAAATCGGACACATAATCCACATGCTTGAGGCCGACGACATCCTATTCCGTGATAGGACCGCAGGAGAATCGTCGCGATCCCATCGCAATTATCATCATCATGAGCAAAAGGACTCTAGCAGAGATAGGAAGCGAATAGGTGGAGAGATCACTGATCAAAGCGAAGATGATAATAGTAGTAAAATCTTGCCCATCCCACTAGATTGA 1503 0.4957 MSVYDAAFVETQLSKRTSIFGLRLWVLIGILVGALIVFSLFLLSLCFTSRRNRRHRRNHKPLTPLVSKEIQEIISTPPNPQPHELHLDIGKAAAAEQHRRVVSAVAFSSGESKGGGGGGGGGGGGGGGGSVCETTSSFGSGSVSAGPEVSHLGWGKWFTLREMEDATGGMCEENVIGEGGYGIVYRGVLSDGTNVAVKNLLNNKGQAEREFRVEVEAIGRVRHKNLVRLLGYCVEGAYRMLVYEYVDNGNLDEWLHGDVDSVSPLTWDIRMNIILGTAKGLAYLHEGLEPKVVHRDVKSSNILLDRQWNPKVSDFGLAKLLCSDHSYVTTRVMGTFGYVAPEYACTGMLTEKSDVYSFGILIMEIITGRSPVDYSKPQGEVNLIEWLKTMVGNRKSEELIDPNLPEKPSSKALKLALLVALKCVDPDATKRPKIGHIIHMLEADDILFRDRTAGESSRSHRNYHHHEQKDSSRDRKRIGGEITDQSEDDNSSKILPIPLD* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0169 500 Pfam Protein kinase domain 173 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy12g0169 500 CDD STKc_IRAK 176 442 - -
Ahy12g0169 500 PANTHER BRASSINOSTEROID INSENSITIVE 1-ASSOCIATED RECEPTOR KINASE 1 483 - -
Ahy12g0169 500 ProSitePatterns Protein kinases ATP-binding region signature. 176 198 IPR017441 GO:0005524
Ahy12g0169 500 ProSiteProfiles Protein kinase domain profile. 170 448 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy12g0169 500 Gene3D Phosphorylase Kinase; domain 1 144 245 - -
Ahy12g0169 500 PANTHER OS01G0323000 PROTEIN 1 483 - -
Ahy12g0169 500 Gene3D Transferase(Phosphotransferase) domain 1 246 453 - -
Ahy12g0169 500 MobiDBLite consensus disorder prediction 453 488 - -
Ahy12g0169 500 ProSitePatterns Serine/Threonine protein kinases active-site signature. 292 304 IPR008271 GO:0004672|GO:0006468
Ahy12g0169 500 MobiDBLite consensus disorder prediction 108 140 - -
Ahy12g0169 500 SMART serkin_6 170 448 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy12g0169 500 MobiDBLite consensus disorder prediction 453 500 - -
Ahy12g0169 500 SUPERFAMILY Protein kinase-like (PK-like) 147 442 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0169 Ahy-Chr12 2928004 2931256 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g0169 157 488 Trihelix Transcription Factor Family AT5G38560 43.860 3.86e-90 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Ahy12g0169 Pkinase 8.00E-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0169 - - gmx:100777348 703.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0169 12 2928004 2931256 Ahy2g0200 2 2333646 2336863 hybridization
Ahy16g1174 16 21387698 21390655 Ahy12g0169 12 2928004 2931256 PCT
Ahy6g0241 6 2955797 2959608 Ahy12g0169 12 2928004 2931256 PCT
Ahy14g2524 14 131128954 131133592 Ahy12g0169 12 2928004 2931256 PCT
Ahy4g2219 4 118135480 118140156 Ahy12g0169 12 2928004 2931256 PCT
Ahy12g0169 12 2928004 2931256 Ahy14g2524 14 131128954 131133592 PCT
Ahy12g0169 12 2928004 2931256 Ahy4g2219 4 118135480 118140156 PCT