Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0163 ATGGATCTTAAATGCCAGTTTCAGTCAAAGCAAGCAGAAGAAATGAAGATATTATCAAAGTGTAAATACTTGAGAGCTTTATCCTTTCATAAAGTTGATGTGCTGCCTAGTTCAATAGGAAAATTGATCCATCTGCGCCACTTGGATCTCTCGTATTGTTCTATTAAGACATTGCCAGAGTCTTTGTGCAACTTGCGTAATTTGCAAACATTGAAGTTGTTTGGTTGTTATGAACTAACTATGTTGCCTGGTGGTTTGCATAATCTAGTGAGTTTGCGGCATCTTGATATTAGGGGAACTTATTTGGAAGAAATGCCCAAAAAAATGAACAAATTGATACACTTGGATGTTTTAAGCTACTTTGTGGTGGGCAAGCATAAAAATAATGGAATCCGGGAATTAGGAGGAATCTCAAATCTTCATGGATCATTTGAGCTTAAGAAGTTGGAGAATGTTGTTGACGCCAAAGAAGCAAAGAGTGCAAGGATGATAGATAAGAAGCACATTGAGGGCATATTGTTGGAATGGTCTTCAGGTGATGAGATAGTTTCAAACAAGCAAACTGAAAGAGAGATATTGGACAGCTTGCAACCTCACCATGGGTTGAAAGAATTGACAATCAAGGGATACAGGGGTACAATATTTCCAGATTGGGTTGGGCATTCCTCCTACCAAAACATGACAAATGTATCTCTACAGTCTTGCAAGAATTGCTGCATGCTGCCTGCACTTGGACAGCTGCCATCTCTTAAGGTCCTGCGCATTGAAGGTTTCGATCAGCTCAAGAGCATTGGCATGGAGTTTTACAAGAATGAAGGCGATCAACAGTCTTCGCCTATTGCACTATTTCCCTCACTGGAGAGATTGGTATTTCGGCATATGCCATGTTGGCAAGTGTGGCAGTTACCTGAATCAGAAACTTTTCCTCAGCTCAAGGTGCTTGAAATAGTAAATTGTCCAATGTTACAGAGAAATATTCTTAGTGACGTATTCTGGAGAATCATTTCTTCTTTGTTGTCAGATGTTTCGAAAGTTCGAAAACTACATGTAAGTAGAGATAGAGGACGATCTGAAACGATGCATCTTGATGAGGATACTTTATCAATTAAGGCATGTGAGTGGGTGATAGATTCTGTATTTAGGGCAATCGGCATCCACCAACAACAAAAGTATGATTTGGTAGAGCTACAAATAGGGAAAAACTGTGGTTCACTGACCGCATTGTCGTTGGATGCCTTTCCCAATCTCAAGAATCTCGGGATACATAGGTCTGGTAATCTGGAATCAATTTCAATGTCAGAGCCACCACATGCTTCTCTTCAACATCTCTCCATCTCTGAATGTCCCGAATTCGAGTCATTTCCAGCAGAAGGACTGGCTGCACCCAACTTGACTGATCTCGATGTTATCAGGTGCTCAAAGTTGGTGGCATTGCCACGTGGCATGAATACTCTCCTCCCCAATTTGCAGTCTCTCAGGATACAAGATTGCCCAAAGATTTCCTGGTTTCCAGAGTGTGGTTTGCCGCCTAACTTGAAAGAGCTTACTGTCGGGAGACAATGGAGGGATCTATTGCCGACGGGCAACTTGGATGCCCTCACTCATCTCACCATTATTGATGATTGTGGGTGTCAAAGCATGATAAAGTCATTCCCAGAGGTGGGTTCGCTGCCTCACCTTCCCTCCCTTACCACTCTCAACATATGCAGGTTCTATAATCTGGCGACATTGGAGTGCAACGAGCTTCTCCGCCTCACCTCCCTTCAACAATTAGACATTCGTATGTGTCCAAATCTGGAGAATATGGAAGGAGAAAAGCTGCCTCCCTCTCTCTTGCTACTTAAAGTTTATGACTGTGATTTGCTGGGAGAACACTGCAAGAACAAGCATCAACTAATCTCGCCCAAAATTTCCCACATTCCCACCATTCAAGTGGACTGCAAAAAAATTGTCTGA 1956 0.4228 MDLKCQFQSKQAEEMKILSKCKYLRALSFHKVDVLPSSIGKLIHLRHLDLSYCSIKTLPESLCNLRNLQTLKLFGCYELTMLPGGLHNLVSLRHLDIRGTYLEEMPKKMNKLIHLDVLSYFVVGKHKNNGIRELGGISNLHGSFELKKLENVVDAKEAKSARMIDKKHIEGILLEWSSGDEIVSNKQTEREILDSLQPHHGLKELTIKGYRGTIFPDWVGHSSYQNMTNVSLQSCKNCCMLPALGQLPSLKVLRIEGFDQLKSIGMEFYKNEGDQQSSPIALFPSLERLVFRHMPCWQVWQLPESETFPQLKVLEIVNCPMLQRNILSDVFWRIISSLLSDVSKVRKLHVSRDRGRSETMHLDEDTLSIKACEWVIDSVFRAIGIHQQQKYDLVELQIGKNCGSLTALSLDAFPNLKNLGIHRSGNLESISMSEPPHASLQHLSISECPEFESFPAEGLAAPNLTDLDVIRCSKLVALPRGMNTLLPNLQSLRIQDCPKISWFPECGLPPNLKELTVGRQWRDLLPTGNLDALTHLTIIDDCGCQSMIKSFPEVGSLPHLPSLTTLNICRFYNLATLECNELLRLTSLQQLDIRMCPNLENMEGEKLPPSLLLLKVYDCDLLGEHCKNKHQLISPKISHIPTIQVDCKKIV* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0163 651 SMART LRR_typ_2 89 112 IPR003591 -
Ahy12g0163 651 SMART LRR_typ_2 42 65 IPR003591 -
Ahy12g0163 651 Coils Coil 146 166 - -
Ahy12g0163 651 ProSiteProfiles Leucine-rich repeat profile. 44 66 IPR001611 GO:0005515
Ahy12g0163 651 SUPERFAMILY L domain-like 335 637 - -
Ahy12g0163 651 Gene3D Ribonuclease Inhibitor 4 331 IPR032675 -
Ahy12g0163 651 PANTHER OS05G0414200 PROTEIN 15 457 - -
Ahy12g0163 651 Gene3D Ribonuclease Inhibitor 520 650 IPR032675 -
Ahy12g0163 651 PANTHER DISEASE RESISTANCE PROTEIN RP 15 457 IPR044974 GO:0006952
Ahy12g0163 651 Gene3D Ribonuclease Inhibitor 332 517 IPR032675 -
Ahy12g0163 651 SUPERFAMILY L domain-like 16 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0163 Ahy-Chr12 2862359 2864997 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g0163 35 118 WRKY Transcription Factor Family AT4G12020 38.824 7.05e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0163 - - ahf:112726344 1321.22