Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0162 ATGGCCGGTGCAGTTGTTGGTGGAGCTTTCCTCTCTGGTTTCATTAACATTGTCATTAACAAGTTCCTTACAGAGGATGTGGCCAACAAGGTGTTTGGCAAGAAGCTTGGCCCTAACTTGGTTGAAAGGCTGAAGACTGCTCTGTTGGGTGCTGAAGCTCTTGTTGCTGATGCTGAGATGAAGCAGTTCGGTAATCCATCTGTGAGGAAGTGGCTCGATAGTCTCCGGGATGCTGTTTACTGTGCTCAGGACTTGCTGGATGCTGTTCTCCTCAAAGCCACCACTCAAAAGAATGCAAGTTCTTCCTGGTCCCTTAGCTTCTTCATCAACCGAGATACAAAGATGGTAGACAAGATGGAAGTGGTGGTTAGAAGAATTGAGGATCTTGGAAAACAAAAAGATTTCCTTGGTCTTGAAAAGATTCCCACTGGTAGCTCATCATGGAGGACTCCATCCACTTCTCTTGTAAAAGGGACTGTGTATGGCAGGGAGGATGACAAGAAGGCCTTAATCAAGATGCTGAATGACAACTGTGAGCATCACTTGTCTGTGTTTGCTATTGTTGGCATAGGTGGGGTTGGTAAAACAACTTTAGCCCAATGGCTGTACAACAATGAAGGGGAGTTCATGAAGGGATTTGATCTGAAAGCATGGGTTTGCGTTTCGGAGAAGTTTGAAGTTGTTGAGACTACAAGGAATGTCATAAAGCAGCTACATGGGGATTCTTGTAGTCTCGATGATTTCAATTCACTTCAAAATGCTCTGAAAGAAGAATTGTCCAATAAGAAGTTCTTTATTGTTCTTGATGATGTTTGGAGTGATGATGGTGACAAATGGAGTAATTTTATGACCCCTTTCCAACAAAATGGGAATAAGGGAAGTATTGTTCTTCTGACTACTCGGGAGGAAAATGTTGCTTCCGCAGTTCAAAATTGTCGCCCTTATTTTCTCAAGAAGTTGTCGGAGGACTATTGTTGGTCAGTGTTTGCAGAAAATGCATCTTTTCCACAATCAAATGGGAGAGCAGCACTTGAAGAAATAGGCAGAAAGATTGTCAAGAAGTGTGATGGCTTGCCATTAGCTGCAGAAACACTTGGTCGTTTGTTATGTACAAAGCACGATGTTGAGGAATGGAACAAGATACTAATGAGTGATATTTGGGGATTTTCTGTGCAGAAGAGTAAGATTATCCCAGCATTACTGATAAGTTACTTCCATCTTCCTCCACATTTAAAGGGTTGTTTTGTTTACTGTGCTTTATATTCCAAAGATCATAAATTTGAGAAAGATGATCTAATCCTTTTGTGGATGGCAGAAGATCTTTTACCACCACCAAAAAGAGGAGAGAGTTTAGAAGAAGTTGGTTGTGAATGTTTTGATGAACTAACTTCCAGATTATTTTTCACAAAGAATGAAGACTTTGGTGATTATTTTGTGATGCATGATCTGTTGCATGATTTAGCAATATTCCTTGCTGGAGATTTCTATTGCAACTCAAAAGAACTTGGTAAAGAGGAGATAAAGATTCAGACTCGGCATTTATGTGTAGATTTACGTCATTGTAGCTCAAAATTTTATAATTCTATTTCTAAAGTAGAATCTTTGAGAACATTATTATTGTTTGGCGCTTTCTCATCTCCCAACTGCAACATTGAAGCGGCAACATGTGAGATATTATCAAAGTGTAAATACTTGAGAGTTTTATCCTTTGATAAACTTGATGTGTTGCCTAATTCAACAGGAGAATTGATCCATCTGCGCCACTTGGATCTCTCTTATACTCATATAAAGACATTGCCTGAGTCTTTGTGCAGCTTGTGTAATTTGCAAACATTGAAGTTGCGTCGTTGTTATGAGCTAACTTCGCTGCCTAGTGGTTTTCATAATCTTGTGAGTTTGCGCCATCTTGATATTAGAGGAACTCATTTAGAAGAAATGCCTAGAAAAATGAGCGAATTGAATCAGTTGCACGTTTTAAGTTATTTTGTTGTGGGCAAGCACAAAGACAATGGAATCCAGGAGTTAGGAGGGCTGGCAAATCTTCATGGATGCCTTGAGATTAAGAAGTTGGAGAATATGGTTGATGTGAAAGAAGCAATGAGTGCAAAGATAATGGATAAGAGTTACATTGATGAATTATGGTTGGAATGGTCTTCAGGTGATGATATAGTTTCAAGCACACAAAAAGAAAGAGACATGCTCGATAACTTGCAACCGCAGAATGGCTTGAAAGAGTTGAAAATCGAGAGATACAAGGGTACAATATTTCCAGATTGGTTGGGGAACTGTTCCTACCAAAACATGACAAGTATATCTCTAAAGTCTTGCAAGAATTGCTGCATGCTGCCTTCACTTGGACAGCTGCCATCTCTTAAGTCCCTAAGCATTAAAGGTTTGGATCAGCTGAGGAGTATTGGCGAAGAGTTTTACAAGAATGAAGGAGATCATCATTCTTCGCATATTGCACCGTTTCCCACACTGGAGACTTTGGTATTTGATAGCATGCCATGTTGGGAGGTGTGGCACGTATCTGAGTCGGAAACATTTCTTCAACTTAGGAATCTTGAAATAACAGATTGCCCAATGTTAAAGGAAGAGATGCGTAATCAGGTATTCTCCAGGATAGTTTCTTCTTTGTCGGATGTTTCCAAAGTTCGCAAACTACTTATGGGCTACCACTATATAACCTCGCACACCGATGCCATGTTTCTTGATGAGGATACTTTAAGAATTAGGGGAAGTGAATTTGTGAAGGAGTCTGCATTGAAGGCAATGATGAGCATCAACCATCTATGTTGCCTCCAAGAAATACACATCGAAGGGTGTAGAAAACTAGAATTCCCAGAGCAACAACAGCACAAGTATGATTTGGTAGAGCTACAAATAGAACACAGCTGCGATTCACTGACCTCCTTGTCGTTGGATGTCTTTCCCAATCTCAAGAATCTCCAGATAAAAGTGTGTAGGAATCTGGAATCAGTGTCAATGTCAGAGGCACCACACGCTGCTCTTCAACGTCTCTCCATCAGTGGATGCGACAAATTAGTGTCATTAGCAGGAGAAGGACTGGCTGCACCCAACTTGACTCATCGCAATGTTAGCAGGTGCTCAAAGTTGGAGGCATTACCACGTGACATGAAGAGTCTACTCCCAAGTTTATAG 3162 0.4064 MAGAVVGGAFLSGFINIVINKFLTEDVANKVFGKKLGPNLVERLKTALLGAEALVADAEMKQFGNPSVRKWLDSLRDAVYCAQDLLDAVLLKATTQKNASSSWSLSFFINRDTKMVDKMEVVVRRIEDLGKQKDFLGLEKIPTGSSSWRTPSTSLVKGTVYGREDDKKALIKMLNDNCEHHLSVFAIVGIGGVGKTTLAQWLYNNEGEFMKGFDLKAWVCVSEKFEVVETTRNVIKQLHGDSCSLDDFNSLQNALKEELSNKKFFIVLDDVWSDDGDKWSNFMTPFQQNGNKGSIVLLTTREENVASAVQNCRPYFLKKLSEDYCWSVFAENASFPQSNGRAALEEIGRKIVKKCDGLPLAAETLGRLLCTKHDVEEWNKILMSDIWGFSVQKSKIIPALLISYFHLPPHLKGCFVYCALYSKDHKFEKDDLILLWMAEDLLPPPKRGESLEEVGCECFDELTSRLFFTKNEDFGDYFVMHDLLHDLAIFLAGDFYCNSKELGKEEIKIQTRHLCVDLRHCSSKFYNSISKVESLRTLLLFGAFSSPNCNIEAATCEILSKCKYLRVLSFDKLDVLPNSTGELIHLRHLDLSYTHIKTLPESLCSLCNLQTLKLRRCYELTSLPSGFHNLVSLRHLDIRGTHLEEMPRKMSELNQLHVLSYFVVGKHKDNGIQELGGLANLHGCLEIKKLENMVDVKEAMSAKIMDKSYIDELWLEWSSGDDIVSSTQKERDMLDNLQPQNGLKELKIERYKGTIFPDWLGNCSYQNMTSISLKSCKNCCMLPSLGQLPSLKSLSIKGLDQLRSIGEEFYKNEGDHHSSHIAPFPTLETLVFDSMPCWEVWHVSESETFLQLRNLEITDCPMLKEEMRNQVFSRIVSSLSDVSKVRKLLMGYHYITSHTDAMFLDEDTLRIRGSEFVKESALKAMMSINHLCCLQEIHIEGCRKLEFPEQQQHKYDLVELQIEHSCDSLTSLSLDVFPNLKNLQIKVCRNLESVSMSEAPHAALQRLSISGCDKLVSLAGEGLAAPNLTHRNVSRCSKLEALPRDMKSLLPSL* 1054
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0162 1053 Pfam Rx N-terminal domain 38 100 IPR041118 -
Ahy12g0162 1053 Gene3D Ribonuclease Inhibitor 495 682 IPR032675 -
Ahy12g0162 1053 ProSiteProfiles Leucine-rich repeat profile. 585 606 IPR001611 GO:0005515
Ahy12g0162 1053 Coils Coil 41 61 - -
Ahy12g0162 1053 Gene3D - 34 125 - -
Ahy12g0162 1053 PRINTS Disease resistance protein signature 258 272 - -
Ahy12g0162 1053 PRINTS Disease resistance protein signature 184 199 - -
Ahy12g0162 1053 PRINTS Disease resistance protein signature 355 369 - -
Ahy12g0162 1053 PRINTS Disease resistance protein signature 604 620 - -
Ahy12g0162 1053 SMART LRR_typ_2 583 606 IPR003591 -
Ahy12g0162 1053 SMART LRR_typ_2 630 653 IPR003591 -
Ahy12g0162 1053 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 418 IPR027417 -
Ahy12g0162 1053 SUPERFAMILY RNI-like 824 1045 - -
Ahy12g0162 1053 Pfam NB-ARC domain 163 382 IPR002182 GO:0043531
Ahy12g0162 1053 Gene3D - 151 313 IPR027417 -
Ahy12g0162 1053 Gene3D - 403 489 IPR036388 -
Ahy12g0162 1053 Gene3D - 319 402 IPR042197 -
Ahy12g0162 1053 PANTHER OS05G0414200 PROTEIN 32 1020 - -
Ahy12g0162 1053 SUPERFAMILY L domain-like 479 865 - -
Ahy12g0162 1053 Gene3D Ribonuclease Inhibitor 683 868 IPR032675 -
Ahy12g0162 1053 Gene3D Ribonuclease Inhibitor 869 1051 IPR032675 -
Ahy12g0162 1053 PANTHER DISEASE RESISTANCE PROTEIN RP 32 1020 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0162 Ahy-Chr12 2857759 2861744 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g0162 186 805 WRKY Transcription Factor Family AT5G45050 22.987 4.62e-10 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0162 - - adu:110277771 1690.63