Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0140 ATGGCTGGAGTTCTTGTTGGTGGAGCTTTTCTGTCTGGCTTCATTAATGTTGTCTTGGACAGGCTCATTTCTGCTGATGCTGTCAACTTGGTTGTGGGTAAGAAGCTTAGCTCTGACTTGGTTGAGAGGCTGAAGAATGCTCTGACAGATGCTGGAGCTCTTGTTGATGATGCAGAGCTCAAGCAACTGGATAACCATGATGTAATGGATTGGCTCAACTGTCTCCGAGATGCTCTTTACACTGCTGATGACATGCTGGACTGCGTCTACACCAAAGCTGCAACCAAAAAGGTCACTCTTTTGGGTAGAATCTTCAATTCTGAAGACAGGAAGATGGTGAATAAAATAAAAAGGGTGGTTAGAAGGATAGAAGATCTTGAGAAACGCAAAGGAAAGCTTGGGCTTGAAAAGATTTCCACTGCTAGCTTCTCCTGGAAAACTGCATCCACTTCTCTTGTAAGAGGGAATGTGTATGGCAGGGAGGATGACCAGAAGGCCTTAATCAAGATGCTGAATGACAACAGTGAGCATCACCTGTCTGTGATCTCTATTGTTGGCATGGGTGGTGTTGGTAAAACTACTTTGGCTCAATGGATGTATAATAATGCAGAGTTGATGGATGGATTTGATAGGAAAGCATGGGTTTGTGTTTCAGAAAACTTCAATATTGTTGAGACTACAAAGAATATAGTAAGGGAGATCTCTACAAATACTCAGGATCTTGATAGCTTCAATTCAATTCAACATGCTTTGAAGAAAGGATTGTCCGAAAAGAAGTTCTTTATTGTTTTGGATGATGTTTGGAGTAATGATCATCATCAATGGAAGGATTTTCTAGCCCCTTTTCAATATGGGGTTAAGGGAAGTACTATTCTTCTAACTACTCGCAAGGAAGATGTCGGTTCAGTTGTCCAAACAAATTATCACCCTCACTATCTCATTCCATTATCAGAAGACTACTGTTGGTCAGTGTTTGCAGCCAATGCTTCTTTTCCAGAATCAAATGGGAGCCCGACACTAGAAGGAATAGGCAGAAGCATTGCTAGGAAGTGTGATGGTTTGCCATTAGCAGCCGAAACCCTTGGTTGCTTGTGCAGAAGGCATGTTGCTGAGGAATGGGAAAAAATATCAAGGAGTGACATTTGGGGATTTTCTATAAATGACAGTAAGATTATTCCAGCATTGTTAGTAAGTTATCATCAACTTCCTTCATATTTAAAGCGTTGCTTTGTTTATTGTTCATTGTTTCCCAAAGATTATCACTTTGAGAAAGATGAACTAATTTTGTTGTGGATGGCCGAAGATCTTTTAAGACTACCAAAGAGAGGAGAGAGCTTGGAAGAGGTTGGTTGCAAGTGTTTTGAAGAATTAGTTTCAAGGTTATTCTTTAAAAAGCTTCAAGACAATGATGAGTATTTTGTGATGCATGATCTCTTGCATGACTTGGCAATATTCCTTGCTGGAGATTTCTATTGGAGAATAGAAGAACTTGGTGAACAAGAAGAAAAGAAGGTTTTCACTCGCCATTTGTCATATTTCTCACCTGGAAGGTTAGATCGTCCAATCTCAAAAGTCTTTAACTCCAATGCGAAGTTGGAATCTTTGAGGACATCGTTGTATATCGATGATTTGTTCAGCATGGAAAGTGTAGCATCTAGGTTTATATGCTTGAGAGTTTTATCCTTTCATAAACTTGATGTATTACCTGAATCAATAGGTGAATCGATTCATCTACGGTATTTGAATCTCTCTTGGACTGACATTAACAGGTTGCCAGAATCATTGTGCAACTTGTATAATCTACAAACATTAATATTGTACGGATGTTCTAAGTTGACCATGTTGCCCATTAGCATGCACAATCTTGTGAATTTACGGCATCTTGATCTTAGGAAAACTTCATTGGAAGAAATGCCTGGAGGAATAAGCAAACTGAAACACTTGCATACTCTACATTCCTTTGTGGTGGGCAAGCATGAAGATAATGGAATCCAGGAATTAGGAGGACTCTCAAATCTTCATGGGTCATTTGAGATTAAGAAAATGGAGAATGTTGTTAATGTCAGAGAAGCAAGGAGTGCAAGGATAATAGATAAGAAGCACATTGACAAATTATGCTTGAAATGGTCTTCAGGTGATGATAAAGTTTCAAACCCAAAAAGAGAAAGAGAAATACTGGACAGCATGGAACCGCACAATGGCTTGAAGGAGTTGAAAATCAAGGGATACAAGGGTACAATATTTTCAGATTGGTTGGGATACTGTTCATACAAAAATATGACAAGTGTATCTCTAAAGTCTTGCAAGAATTGCCACATGCTGCCTTCGCTTGGACAGCTGCCATCTCTTAAGTCCCTCTGCATTCAAAGTTTTGATCAGCTGAAGATTATTGGCATGGAGTTTTTACAAGAATGA 2415 0.393 MAGVLVGGAFLSGFINVVLDRLISADAVNLVVGKKLSSDLVERLKNALTDAGALVDDAELKQLDNHDVMDWLNCLRDALYTADDMLDCVYTKAATKKVTLLGRIFNSEDRKMVNKIKRVVRRIEDLEKRKGKLGLEKISTASFSWKTASTSLVRGNVYGREDDQKALIKMLNDNSEHHLSVISIVGMGGVGKTTLAQWMYNNAELMDGFDRKAWVCVSENFNIVETTKNIVREISTNTQDLDSFNSIQHALKKGLSEKKFFIVLDDVWSNDHHQWKDFLAPFQYGVKGSTILLTTRKEDVGSVVQTNYHPHYLIPLSEDYCWSVFAANASFPESNGSPTLEGIGRSIARKCDGLPLAAETLGCLCRRHVAEEWEKISRSDIWGFSINDSKIIPALLVSYHQLPSYLKRCFVYCSLFPKDYHFEKDELILLWMAEDLLRLPKRGESLEEVGCKCFEELVSRLFFKKLQDNDEYFVMHDLLHDLAIFLAGDFYWRIEELGEQEEKKVFTRHLSYFSPGRLDRPISKVFNSNAKLESLRTSLYIDDLFSMESVASRFICLRVLSFHKLDVLPESIGESIHLRYLNLSWTDINRLPESLCNLYNLQTLILYGCSKLTMLPISMHNLVNLRHLDLRKTSLEEMPGGISKLKHLHTLHSFVVGKHEDNGIQELGGLSNLHGSFEIKKMENVVNVREARSARIIDKKHIDKLCLKWSSGDDKVSNPKREREILDSMEPHNGLKELKIKGYKGTIFSDWLGYCSYKNMTSVSLKSCKNCHMLPSLGQLPSLKSLCIQSFDQLKIIGMEFLQE* 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0140 804 Gene3D - 398 484 IPR036388 -
Ahy12g0140 804 Coils Coil 41 61 - -
Ahy12g0140 804 PRINTS Disease resistance protein signature 254 268 - -
Ahy12g0140 804 PRINTS Disease resistance protein signature 351 365 - -
Ahy12g0140 804 PRINTS Disease resistance protein signature 181 196 - -
Ahy12g0140 804 PRINTS Disease resistance protein signature 596 612 - -
Ahy12g0140 804 PANTHER DISEASE RESISTANCE PROTEIN RP 35 801 IPR044974 GO:0006952
Ahy12g0140 804 SUPERFAMILY L domain-like 474 799 - -
Ahy12g0140 804 Gene3D - 315 397 IPR042197 -
Ahy12g0140 804 PANTHER OS05G0414200 PROTEIN 35 801 - -
Ahy12g0140 804 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 413 IPR027417 -
Ahy12g0140 804 Gene3D - 147 309 IPR027417 -
Ahy12g0140 804 Coils Coil 116 136 - -
Ahy12g0140 804 Gene3D Ribonuclease Inhibitor 518 803 IPR032675 -
Ahy12g0140 804 Pfam Rx N-terminal domain 38 107 IPR041118 -
Ahy12g0140 804 Gene3D - 15 131 - -
Ahy12g0140 804 Pfam NB-ARC domain 161 378 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0140 Ahy-Chr12 2667132 2672521 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g0140 568 651 WRKY Transcription Factor Family AT4G12020 37.647 6.07e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0140 - - ahf:112726295 1005.74