LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy12g0109	ATGGCTAACAAAGTGAATGAACATGATCAAACAGTGAATTTGATTGAGAAGTGCCAAGTTGGTCCTCCACCAGGGTCAGTTCCTTCTCCAAACTCTATTCCACTTTCTTTCTTTGACCTTCCATGGCTATGTTGTCCTATAACATGTAAACGCATTTTCTTCTATGACTTTCCTTACCCCAAAACACAGTTCGTCGAAAAAGTGCTTCCAAATCTCAAACACTCCCTTTCTCTTACACTCAAACACTTTTTTCCTTTCTCTTCCAACATAATTTTCCCTCCAAAGCCACAAAGCCCTCACATCCTTTACTCTGAAGGTGACACTCTTTCCTTTATTGTTGCTGAGTCCACAACAAATTTCAACAACCTCATATCTCATGCACCAAAAGATGCCACGATCTTGGATCCTTTTGTTCCTACTTTGCCCTCACCACGTGCCTTACAAGATGGTACCCTGTTGATCTCTCCTGTGGCTATCCAAGTCACTGTCCTTCCAAATTCTGGTTTCACTATATGCGTGACTTTTAGCCATATGGTTGGTGATGGAAGAGCCTTTCATAACTTTCTCAAGTTTTGGTCTTCACTTTGTATGTCAAAAAGGGTTACGTCTTCTTTCGACGAGAGCTTACTTTCTTTCCCGATCCTTGCTAGGGACAAAATTGAAGATCCAAATAAGCTTAAGCCTAATTTCTTAGAAGAAATGTGGAATATGTCCTTAAATAGCATAGCTTGGATGGACTCTGTTATTCCATATAATGCTACGAATGACATGGTGAGACAAACTACTGTGTTGAGGCCTGAGCATATTGAGAATTTGAAGAAATTAGTGTCTATGAAGTGCCAAAGCCTTGGTGAAGGGACATCATTACACGTGTCAACGTTTGTGGTGACATGCTCTTTGATTTGGGTTTCTAATGTTATGTTAGGATTGACCCATGTTGGTGTTGAAGAATTTCCCAATGAAGATGAAGAGGTATACTTTTTGTTCTTTGCAGATTGTCGTTACCTTAGTGAATTAAAAATACCCTTAACATACTTCGGGAATTGTTTGGCTGGTGCTTTAGTAGCAATTCAGAAGAGCAAGCTAGTGGGACAAAATGGTATTTTTGAGGCAGCTATTGCTATTGGAAGTAAAATTAGAGATGTTCAATCTGAACCCTACGAAGGTGTTGAAGGATTGATGTCATTAGCTATGATGAAAAATAATGCAGCAATGACTCAACGTGTGTTGGCTGTTACAGGTTCATCAAAGTTTGGTTCATATGAGACCGACTTTGGGTGGGGAAAACCCAAACTGAATGAATTACTTCATGCAAATTATCCAGGAATATTCTCTCTCTCTCCTTGCAGGGACATAGATGATGGAGTTGAAGTTGGAGTTGCACTGGAAACTGATCGTATTGACAAGTTCAATATCATTTTAAACGAGCTCCTTACAAATACTGCAGATCTTCAAGATTAA	1461	0.3949	MANKVNEHDQTVNLIEKCQVGPPPGSVPSPNSIPLSFFDLPWLCCPITCKRIFFYDFPYPKTQFVEKVLPNLKHSLSLTLKHFFPFSSNIIFPPKPQSPHILYSEGDTLSFIVAESTTNFNNLISHAPKDATILDPFVPTLPSPRALQDGTLLISPVAIQVTVLPNSGFTICVTFSHMVGDGRAFHNFLKFWSSLCMSKRVTSSFDESLLSFPILARDKIEDPNKLKPNFLEEMWNMSLNSIAWMDSVIPYNATNDMVRQTTVLRPEHIENLKKLVSMKCQSLGEGTSLHVSTFVVTCSLIWVSNVMLGLTHVGVEEFPNEDEEVYFLFFADCRYLSELKIPLTYFGNCLAGALVAIQKSKLVGQNGIFEAAIAIGSKIRDVQSEPYEGVEGLMSLAMMKNNAAMTQRVLAVTGSSKFGSYETDFGWGKPKLNELLHANYPGIFSLSPCRDIDDGVEVGVALETDRIDKFNIILNELLTNTADLQD*	487

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy12g0109	486	Gene3D	-	12	245	IPR023213	-
	Ahy12g0109	486	PANTHER	ANTHOCYANIN 5-AROMATIC ACYLTRANSFERASE	10	482	-	-
	Ahy12g0109	486	Pfam	Transferase family	30	471	-	-
	Ahy12g0109	486	Gene3D	-	253	481	IPR023213	-
	Ahy12g0109	486	PANTHER	-	10	482	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy12g0109	Ahy-Chr12	2196820	2198280	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy12g0109	52	477	Monolignol Biosynthesis Gene Families	AT5G48930	21.591	2.26e-11	63.9

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy12g0109	-		-	ahf:112729058	976.852