Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0106 ATGGAAAAAATTGAAGTTGAAATTATTTCTAGAGAAAACATTAGACCTTCTTCCCCCACACTCTCTCCCTTAAGAACCTTCAAATACTCCATTTTAGATCAACTTGTTCCCTTTCCTCATGCAGTAGCCATCCTATTCTACACCTCACAAAATTTGTCTGAATTCCCAAAGAGATTAGAGTTGCTTAAACAATCATTATCTGAAACACTAACACTATTTTATCCTCTTGCTGGAAAGACCAAAGATGATTTCTCCATTGATTGCAATGATGAAGGTGCTAACTTTGTAGTAGCAAAAGTGAATTGTCCTATTTCAAAGTTTCTAAGGAAGCCTGATTTGAATTCGCTGAACATGCTTTTTCCAATTACTCCATACTTGGAGGAAACAACGACAGGAGCTCATGTGACTAACATTCAAGTTAATGTCTTTGATTGTGGTGGAATTGCAATTGGATTTTGCATTTCTCATAAGATCATTGATGGTGAATCAGTTAACACCTTCCTGAAGGTGTGGACAGAAAGAGCCGACACCACACGCAATTCAAAACCTTTGACAGAACCAAACTTTGCTACAAGTTCGTATTTCCCTACAAGTACTTTTTATTTCAGAGACTTGTCAAAGAAAAGCTGGGGTTCCCTTCTTAAGGAAGAAAAATGGGTCACAAGGAGGATTTTGTTCAAAAATTCAACTATTGCCACCCTCAAGGCTCAAATAGTGGCAAAATCTTCAACTACACGTGTTCAGATACTTTCTGCATTGTTGTGGAAGTGTTTCATGGCCGCTTCAAAGGCTCAATTTGGAATTCAAAGGCCTTCTATGGTGATTAACACAGTGAACCTTCGCCGAAAAATGGAAGAGTCTCTACATCCTGAGAATTCTATAGGAAATTTTTTGTGGTTTACAACTTCAGAACACATGAGTGAGCATGAGGTGAGTTTGGATGAGTTGGTGAGCAAACTGAAGAAGTCAGTTGAAGAAGTTGATAAGGATTTTATTGCAAGATTGCAAAGTGAAAAGGAGGGGAGTTCAATCATGGAAAATGCTCTAAGAAGAATTAGTGGTGAAACATGGTCTAATAATAAAGGTGACGAGGCATTATTGGAAAGTTTAGCTTTTAATAGTTGGATTAACTTTGGAGGCTATGATGCTGATTTTGGATGGGGAAAACCTAGATGGGCGAGTAGTGTTGGTAAAGAAGGTAATTTACTGTTACTGAATAAGATAATTTTGGTTGATACTAACTCCAAAGATGGTATAGAAGCTTGGGTTACCTTGGAAGAGGAGAAAATGAAGCATTTGGTTTCAAGCACTGAATTACTCACTTATGCAACTCTTGATCCAAGCCCTTTGCCAGATAGCTCAAAATTATAG 1371 0.3771 MEKIEVEIISRENIRPSSPTLSPLRTFKYSILDQLVPFPHAVAILFYTSQNLSEFPKRLELLKQSLSETLTLFYPLAGKTKDDFSIDCNDEGANFVVAKVNCPISKFLRKPDLNSLNMLFPITPYLEETTTGAHVTNIQVNVFDCGGIAIGFCISHKIIDGESVNTFLKVWTERADTTRNSKPLTEPNFATSSYFPTSTFYFRDLSKKSWGSLLKEEKWVTRRILFKNSTIATLKAQIVAKSSTTRVQILSALLWKCFMAASKAQFGIQRPSMVINTVNLRRKMEESLHPENSIGNFLWFTTSEHMSEHEVSLDELVSKLKKSVEEVDKDFIARLQSEKEGSSIMENALRRISGETWSNNKGDEALLESLAFNSWINFGGYDADFGWGKPRWASSVGKEGNLLLLNKIILVDTNSKDGIEAWVTLEEEKMKHLVSSTELLTYATLDPSPLPDSSKL* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0106 456 Gene3D - 216 442 IPR023213 -
Ahy12g0106 456 PANTHER VINORINE SYNTHASE-LIKE 6 450 - -
Ahy12g0106 456 PANTHER F21J9.9 6 450 - -
Ahy12g0106 456 Gene3D - 3 202 IPR023213 -
Ahy12g0106 456 Pfam Transferase family 5 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0106 Ahy-Chr12 2085776 2087625 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g0106 4 431 Monolignol Biosynthesis Gene Families AT5G48930 24.672 5.49e-22 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0106 - - aip:107628104 675.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0106 12 2085776 2087625 Ahy2g0153 2 1706675 1708380 hybridization