Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0103 ATGAAAGATGTTAAAGTTGAAATCATTTCTAGAGAAAACATTAGGCCTTCTTCTCCCACACCCTCTCATCTAAGAACCTTCAAACACTCCCTTTTAGATCAACTTGTTCCCATTCCTTATGCTATAGTCATCCTATTCTACTCTTCACACAATCTCTCTGAATTCTCCAAGAGACTAGAATTGCTTAAACAATCATTATCTGAAACACTAACACAATTCTACCCTCTTAGTGGCAAGATCAAAGATGATTTGTCCATTGATTGCAATGATGAAGGTGCTAATTTTGTAGTAGCAAAAGTGAATTGTCCTATTTTAGAGTTTCTAGAAAAGCCTGATATGGATTCATTACACAAGTTTCTTCCAATTAGTAATCCACTCTCCCTTGAAACATTTATAGGAACTCATGTGACTAACATTCAAGTCAATGTCTTTGATTGTGGTGGAATTGCCATCGGATTTTGCATTTCTCATAAGATCATCGATGGTGGTTCATTGGACACTTTCTTGAAGATGTGGACAGAAAAAACCAACATCAACCGCGATTTAAAACTCTTGACAGAACCAAATTTTTCTACAAGTTCTCTCTTCCCTACAAGTACTTTACATTTCAGAGACTTATCAAAGAAAATTTGGAGTTCCTTGTTTAGAGAAGAAAAATGGGTCACAAGAAGATTCTTGTTCACAAATTCAGCTATTAACACACTCAAGGCTCAAATACTAGCTAAATCTTCATCTGATAATCCATTGAAGAATCATCCTACACGTGTTCAGATAGTTTCTGCATTTTTGTGGAAGTGTTTCATGGCTGCATCGAAGTTACAATTTGAAACTCAAAGGCCTTGTGGGATTATTCATATGGTGAATCTTCGCCGAAGAATGGACAAATCTCTACGTCCTGAGAATTCTATAGGGAATTTTCTATGGTTCACACTAGCAGATCACATGGATGAACATGAGTTGAGTTTGGATGAGTTGGTGAGTAAATTGAAGAACTCAATTGAATTAGTTGACAAAGATTTTGTTGCAATATTGCAAAGTGATGAGGGAAGTTCAATTATGGAAAATGGTCTTAGGATTCTTGACAGTAAAATAAAGGATGAGGAATTGGAAGCATTTAGTTTTAGTAGTTGGTGTAACTTTGGATACTATGATGCTGATTTTGGATGGGGAAAACCTATGTGGGTGAGTAATATTGGTTTAAAGAGTACTTATGTGTTTTTGAATATGATATTTTTGGTTGATACCAAATTCAAAGATGGTATAGAGGCTTGGGTTACCTTGGATGAGATGAAAATGAAGCATTTGGAGTTATTCACTGAATTGCTCAATTATGCAACTCTTGATCCAAGTCCTTTGACAATGTCTAACTCAAGGTTATAG 1380 0.3551 MKDVKVEIISRENIRPSSPTPSHLRTFKHSLLDQLVPIPYAIVILFYSSHNLSEFSKRLELLKQSLSETLTQFYPLSGKIKDDLSIDCNDEGANFVVAKVNCPILEFLEKPDMDSLHKFLPISNPLSLETFIGTHVTNIQVNVFDCGGIAIGFCISHKIIDGGSLDTFLKMWTEKTNINRDLKLLTEPNFSTSSLFPTSTLHFRDLSKKIWSSLFREEKWVTRRFLFTNSAINTLKAQILAKSSSDNPLKNHPTRVQIVSAFLWKCFMAASKLQFETQRPCGIIHMVNLRRRMDKSLRPENSIGNFLWFTLADHMDEHELSLDELVSKLKNSIELVDKDFVAILQSDEGSSIMENGLRILDSKIKDEELEAFSFSSWCNFGYYDADFGWGKPMWVSNIGLKSTYVFLNMIFLVDTKFKDGIEAWVTLDEMKMKHLELFTELLNYATLDPSPLTMSNSRL* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0103 459 Gene3D - 3 204 IPR023213 -
Ahy12g0103 459 Pfam Transferase family 5 436 - -
Ahy12g0103 459 Gene3D - 217 443 IPR023213 -
Ahy12g0103 459 PANTHER F21J9.9 6 454 - -
Ahy12g0103 459 PANTHER VINORINE SYNTHASE-LIKE 6 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0103 Ahy-Chr12 2048086 2049625 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g0103 4 438 Monolignol Biosynthesis Gene Families AT5G48930 24.670 3.44e-22 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0103 - - aip:107628104 642.884