Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0102 ATGGAAGAAGTTAAAGTTGAAATCATTTCTAGAGAAAACATTAAACCTTCTTCTCCCACACCCTCTCACCTAAAAATCTTCAAACACTCTTATTTAGATCAACTTGTTCCTTTTCCTCATGCAATTATCATCCTATTCTACACCTCACAAAATCTCTCTGAGTTTCCTAAGAGATTAGAGTTGCTTAAACAATCATTATCTGAAACACTAACACAATTCTACCCTCTTGCTGGAAAGATCAAAGATGAGTTGTCCATTGATTGCAATGATGAAGGTGCTAACTTTGTAGTAGCCAAAGTGAATTGCCCTATTTCAAAGTTTCTAGAGAAGCCTGATTTGAATACCCTGAACAAGTTTCTTCGAACTACTCCATACTTCGAAGAAACAATGATAGGAGATCATGTGACTAACATTCAAGTTAATGTCTTTGATTGTGGTGGAATTGCAATTGGATTTTGCATTTCTCATAAGATCATTGATGGTGATTCACTTGACACTTTTCTGAAGGTGTGGACAGAAAGAACCGGCTGCAACCACAATTCAGAACTGTTGACAAAACCAAACTTTGCTACAAGTTCGTTGTTCCCTCCAAGTACTTTACATTTCAGAGACTTGTCAAGGAAAATATTGGGTTCCATTTTTAGGAAAGGAAAATGGGTCACAAGGAGATTTCTATTCAAAGATTCAGCTATTGCCACCCTCAAGACCCAAATAGTGGCAAAATCTTCATCCGATCCATTGAAGAATCATCCCAATACTCCTACACGTGTTCAGATAATTTCTGCATTGTTCTGGAAGTATTTCATGGCTGCATCAAAGGATCAATTTGGAACTCAGAGGCCTTCTATTCTGCTGAATACAATGAATCTTCGCCGAAGAATGGCAGAGTCTCTACATCCTAAGAATTCTATAGGAAATTTTCTGTGGTTGACAATTTCAGAACACAAGAGTGAGCATGAGTTGAATTTGAATGAGTTGGTGAGTAAAGTGAAGAAGTCAATGGAAGAAATTGATAAGGATTTTGTTGCAAGTTTGCAAAGTGAGGAAGAATGGAGTTCAATCATAGAAAATGCTCTTAGGAAATTAAGTGGTGAAACATGGGCTAATAATAATAAGGGTGATGAGGCATTGGAAGGATTAAGTATTAATAGTTGGTGTAACTTTGGATTATATGATGCTGATTTTGGATGGGGAAAACCTATGTGGGTGAGTAGTGTTGGTATACAAGGTAATTCAGTGTTAGCTGATAAGGTAATCTTGGTTGATACCAAATTCAAAGATGGTATAGAGGCTTGGGTTACCTTGGATGAGGACAAAATGAAGTATTTGGTGTCAAGCACTGAATTACTCGCTTATGCAACTCTTGATCCAAGTCCTTTGGCAGTGTCTAACTCAAAGTTATAG 1404 0.3718 MEEVKVEIISRENIKPSSPTPSHLKIFKHSYLDQLVPFPHAIIILFYTSQNLSEFPKRLELLKQSLSETLTQFYPLAGKIKDELSIDCNDEGANFVVAKVNCPISKFLEKPDLNTLNKFLRTTPYFEETMIGDHVTNIQVNVFDCGGIAIGFCISHKIIDGDSLDTFLKVWTERTGCNHNSELLTKPNFATSSLFPPSTLHFRDLSRKILGSIFRKGKWVTRRFLFKDSAIATLKTQIVAKSSSDPLKNHPNTPTRVQIISALFWKYFMAASKDQFGTQRPSILLNTMNLRRRMAESLHPKNSIGNFLWLTISEHKSEHELNLNELVSKVKKSMEEIDKDFVASLQSEEEWSSIIENALRKLSGETWANNNKGDEALEGLSINSWCNFGLYDADFGWGKPMWVSSVGIQGNSVLADKVILVDTKFKDGIEAWVTLDEDKMKYLVSSTELLAYATLDPSPLAVSNSKL* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0102 467 Gene3D - 217 452 IPR023213 -
Ahy12g0102 467 Pfam Transferase family 5 449 - -
Ahy12g0102 467 PANTHER VINORINE SYNTHASE-LIKE 6 462 - -
Ahy12g0102 467 PANTHER F21J9.9 6 462 - -
Ahy12g0102 467 Gene3D - 3 203 IPR023213 -
Ahy12g0102 467 Coils Coil 316 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0102 Ahy-Chr12 2041484 2043106 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g0102 4 408 Monolignol Biosynthesis Gene Families AT5G48930 24.242 1.58e-20 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0102 - - aip:107628104 822.387