Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0101 ATGGAAGAAGTTAAAGTTGAAATTATTTCTAAAGAAAATATTAAACCTTCATCTCCTACACCCTCTCACTTAAAAACCTTCAAACACTCCTTTTTAGATCAACTTGTTCCTTTTCCTCATGCAACAATCATCCTATTCTACACCTCACAAAATCCCTTTGAATTTTCTGAGAGATTAGAGTTGCTTAAACAATCATTATCTGAAACACTAACACAATTCTACCCTTTTGCTGGAAAGATCAAAGATGATTTGTCCATTGATTGCAATGATGAAGGTGCTAACTTTGTAGTAGTCAAAGTGAATTGTTCTATTTCAAAGTTTCTAAAAAAGCCTGATTTGAATTCATTGAACAAGTTTATTCCAACTACTCCAAACTTTGAAAAAACAATGACAGGAGCTCATGTGATTAACATTCAAGTTAATATCTTTGATTGTGGTGGAATTGCAATTGGATTTCGCATTTCTCATAGGATCGCTGATGGTGATTCAATTGACACCTTCCTGAAGGCATGGACAGAAAGAGCCGGCTACAACTGCAATTCAGAACTTTTGACAGAACCAAACTTTGCTACAAGTTCTCTGTTCCCTACAAGTACTTCACATTTCAGAAACTTGTCAAGGAAAACATGGGGTTCCATTTTTAGGAAAGAAAAATGGGTCACAAGGAGGTTTTTGTTCAAAAATTCAGCTATTGCTACCCTCAAGGCTCAAATAGTGGCAAAATCTTCATCTGACCCATTGAAGAATCATCCTAATGCTCCTACACGTGTTCAGATAGTTTCTGCCTTGTTGTGGAAGTATTTCATGGCTGCGTCGAAGGATCAATTTGGAACTCAAAGGCCTTCAATGGTGTTTAACGCGGTGAACCTTCGCCGAAGAATGGAAGAGTCTCTACATCCTGAGAATGCCATAGGGAATTTTCTATGGTTGGCAACTTCAGAACACATGAGTGAGCATGAGTTGAATTTGAATGAGTTGGTGAGTGAAGTGAAGAAGTCAATTGAAGAAATTGATAAGGATTTTGTTGCAAGGTTGCAAAGTGACAAGGAAGGGAGTTCAATCATAGAAAATGCTCTTGGAAAAATTAGCGGTGAAACATGGTCTAATAATAAGAGTGATGAGGCATTGGAAAGATTATGTATTAGTAGTTGGTGTAACTTTGGATTCTATGATGTTGATTTTGGATGGGGAAAACCAATATGGATGAGTAGTATTGGTATAGAAAGTAATTCAGTGTTAACCAATATGATAATCTTGATTGATACTAAGTTCAAAGATGGTATAGAAGCTTGGATTACCTTGGATGAGGAGAAAATGAAGTATTTGGTGTCAACTGAATTACTCACTTATGCAACTCTTGATCCAAGTCCTTTGACAGTGTCTAACTCAGGCTTGCAGGCTTGA 1404 0.3682 MEEVKVEIISKENIKPSSPTPSHLKTFKHSFLDQLVPFPHATIILFYTSQNPFEFSERLELLKQSLSETLTQFYPFAGKIKDDLSIDCNDEGANFVVVKVNCSISKFLKKPDLNSLNKFIPTTPNFEKTMTGAHVINIQVNIFDCGGIAIGFRISHRIADGDSIDTFLKAWTERAGYNCNSELLTEPNFATSSLFPTSTSHFRNLSRKTWGSIFRKEKWVTRRFLFKNSAIATLKAQIVAKSSSDPLKNHPNAPTRVQIVSALLWKYFMAASKDQFGTQRPSMVFNAVNLRRRMEESLHPENAIGNFLWLATSEHMSEHELNLNELVSEVKKSIEEIDKDFVARLQSDKEGSSIIENALGKISGETWSNNKSDEALERLCISSWCNFGFYDVDFGWGKPIWMSSIGIESNSVLTNMIILIDTKFKDGIEAWITLDEEKMKYLVSTELLTYATLDPSPLTVSNSGLQA* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0101 467 Gene3D - 216 449 IPR023213 -
Ahy12g0101 467 PANTHER VINORINE SYNTHASE-LIKE 6 458 - -
Ahy12g0101 467 Pfam Transferase family 5 443 - -
Ahy12g0101 467 Coils Coil 316 336 - -
Ahy12g0101 467 Gene3D - 3 204 IPR023213 -
Ahy12g0101 467 PANTHER F21J9.9 6 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0101 Ahy-Chr12 2027763 2029383 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g0101 4 440 Monolignol Biosynthesis Gene Families AT5G48930 24.222 1.03e-24 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0101 - - aip:107628104 746.888