Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0100 ATGAGAAAGGAAGGTCGTGCTTTGGGAGGGGGTGTTGTTTGGGGAAGAGGGGAAAGGAGGAAGAGGAAAGGAAAGGTGGAGAATCTCCACACTGCTGCCACTCCCGCCATCATTGCATCGCCGTTCTCATTGCAATTCGCGATGTCACCACCACTGCCGCAGTACTTTTCACGCGATCCACCACCACCACCGCAACTCTTCTCCCCTCATGATTCGCAGTTAACCGCCGCAGTCCCTCCTTCCCCACCACCGCCTCGAGCAGCCACCCTATTCTACACCTCACAAAATCTATGTGAATTCCCAAAGAGATTAGAGTTGCTTAAACAATCATTATCTGAAACACTAACACAATTCTACCCTCTTGCTGGAAGGATCAAAGATGATTTGTCCATTGATTGCAATGATGAAGGTGCTAACTTTGTAGTAGCCAAAGTGAATTGTCCTATTACAAAGTTTCTAGAGAAGCCTGATTTGAAATCATTGAATGAGCTTCTTGCAACTACTCCATACTCTGAAGAACCAATGATAGGAGCTCATGTGACTAACATTCAAGTCAATGTCTTTGATTGTGGTGGAATTGCAATTGGATTTTGCGTTTCTCATAGGATCTTTGATGCTAATTCATTGAACACCTTCACTAAGGTGTGGATAGAAAGAGCCACCAGCTGCAACCGAAATTCAAAACCTTTGACAGAACCCAACTTTGCTATAAGTTCTCTGTTCCCAACAAGTACTTTACATTTCAGAGACTTCTCAAAGAAAATCTGGGGTTCCTTTTTGAAGGAAGAAAAATGGGTCACAAGAAGGATTGTGTTCAAAAATTCAACTATTGCCACCCTCAAGGCTCAAATAATGGCAAAATCTTCATCTGATTCATTGAAGAATCATCTTAACACTCCTACACGTGTTCAGATAGTTTATGCATTGTTGTGGAAGTGTTTCATGGCTGCATCAAAGGCTCAATTTGGAACTCAAAGGCCTTCTATGGTGATTAACACGGTGAATCTTCGTCGAAGAATGGAAAAATCTCTACGTCCTGAGAATGCTATAGGAAATTTTGTGTGGTTGACAACTTTAGAACACATGAGTAGTGAGCATGAGTTGAGTTTGGATGAGTTGGTGAGTAAATTAAAGAAGTCAAATGAAGAAATTGATAAGGATTTTGTTGCAAGATTGCAAAGTGAAGAAGAAGGGAGTTCAATAATGGAAAATGCTCTTAGGAGAATTAGTGGTGAAACATGGTCTAATAATAATGAGGGTGATGATGAGGCATTAGAAACCTTATGGTTTAATAGTTGGTGTAATTTTGAAGGTTATGATGCTGATTTTGGATGGGGAAAACCTATGTGGCTGAGTAGTGTTGGTGTAAAAGATAATTCAATGTTAGCCAATAAGATAATTTTGGTTGATACTAAGTTCAAAGATGGTATAGAAGCTTGGACTACCTTGGATGAGGAGAAAATGAAGCATTTGGTTTCAAGCACTGAATTACTCACTTATGCAACTGTTGATCCAAGTCCTTTAGCAGTGGCTAGCTCAAAATTATAG 1548 0.4044 MRKEGRALGGGVVWGRGERRKRKGKVENLHTAATPAIIASPFSLQFAMSPPLPQYFSRDPPPPPQLFSPHDSQLTAAVPPSPPPPRAATLFYTSQNLCEFPKRLELLKQSLSETLTQFYPLAGRIKDDLSIDCNDEGANFVVAKVNCPITKFLEKPDLKSLNELLATTPYSEEPMIGAHVTNIQVNVFDCGGIAIGFCVSHRIFDANSLNTFTKVWIERATSCNRNSKPLTEPNFAISSLFPTSTLHFRDFSKKIWGSFLKEEKWVTRRIVFKNSTIATLKAQIMAKSSSDSLKNHLNTPTRVQIVYALLWKCFMAASKAQFGTQRPSMVINTVNLRRRMEKSLRPENAIGNFVWLTTLEHMSSEHELSLDELVSKLKKSNEEIDKDFVARLQSEEEGSSIMENALRRISGETWSNNNEGDDEALETLWFNSWCNFEGYDADFGWGKPMWLSSVGVKDNSMLANKIILVDTKFKDGIEAWTTLDEEKMKHLVSSTELLTYATVDPSPLAVASSKL* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0100 515 PANTHER F21J9.9 101 508 - -
Ahy12g0100 515 Gene3D - 58 248 IPR023213 -
Ahy12g0100 515 MobiDBLite consensus disorder prediction 1 25 - -
Ahy12g0100 515 MobiDBLite consensus disorder prediction 53 83 - -
Ahy12g0100 515 Pfam Transferase family 88 497 - -
Ahy12g0100 515 Gene3D - 262 500 IPR023213 -
Ahy12g0100 515 MobiDBLite consensus disorder prediction 54 68 - -
Ahy12g0100 515 PANTHER VINORINE SYNTHASE-LIKE 101 508 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0100 Ahy-Chr12 2012628 2016990 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g0100 105 456 Monolignol Biosynthesis Gene Families AT5G48930 24.259 2.89e-19 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0100 - - ahf:112729054 999.193