Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0090 ATGGCTAGTGTAGTTGGTGGAGCTTTCCTCTCTGGCTTTATTAGCATTGTCATTAACAAGTCCCTTAGAGAGGATGCGGTCAACCAGGTCTTCGGCAAGAAACTTGGCCCTGGCTTGGTTGAGAGGCTGAAGATTTCACTGCTTGCTGCCGAAGCTGTGCTTGATGATGCTGAGTACAAGCAACTGGGCGATGATCGTGTGAGGGATTGGCTCAACTGTCTGAGAGATTCTGTTTATGATGCTGATGACTTTCTGGACGCTGTACACACCAAAGCCGCCACTCAAAAGGAGGTACGTTCTTCCAAGCTTAGTTTCTTCCGTAACCGACATAGGAAGATGGTAGATAACATGGAAGAGGTGGTTGCAAGAATAGAATTTCTTGTAAAGCAGAAAGATGACCTTGGTCTTCAAAAGAGTACCAAGGATAATAACTTGTCATCATCATCATCATCATCATGGCGAGAAACCACATGTCTGATGCAAGGGAAAATATATGGCAGGGAGGATGATCAACAAGCTTTAACCAAAATAATAAAGGACAACAGTGAATCTCAGTTATCTGTGATTCCTATTGTTGGCATGGGCGGGGTTGGTAAAACAACCTTAGCCAAATGGGTGTACAATTTCACAGAGGGATTTGATGATGATAAAAAAGTATGGGTCTGCATCTCTGAAACATTTGATGTTGCTGAGATTACAAAGAAAACCATTGAGGAGATCACTAAAACACCTTGTACCCTTGGGAGTTTAAATTCGCTTCAAAACGAATTGAAGAAAAACTTGTCGGGAAAGAAGTTCTTTATTGTTCTAGACGATGTCTGGAGCGAAGATGCCGATAAGTGGGAGCAATTTATAACTCCTTTTCACTATGGGGCTAAGGGTAGTACAATTCTTCTAACAACTCGCAATCAAGAGGTTGCTTCAGTAGTTCACACATGTCCCTCTTACATTCTTAATGGGTTGTCGGAAGAGTCTTGTTGGTTATTGTTTGCAGCCAATGCATGTTTTCCAGTGTCAAACGGGAACCGAAAACTAGAGGATGTCGGTAGAAAGATTGTCAAGAGGTGTAAGGGGTTGCCATTAGCTGTTGAAACACTTGGGCGTTTGTTGCGAGGAAAGGACGATGTTAAAGAATGGAATGCTGTTTTAAGGAGTGACATCTGGGAATATTCTACGAAAAATAGTAAAATTATTCCAGCATTGTTAATAAGCTACTTCCAGCTACCTCCTTACTTGAAGCGTTGTTTCGTTTATTGTTCATTGTTTCCCAAAGATCACAGGTTTGAGAAAAATGAACTAGTTTTGCTGTGGATGGCTGAAGATCTTTTAAGGGTACCAAAGAGAGGAGAGAGTTTAGAAGAGGTTGGTTCTCAGTGTTTTGAAGAATTAGCTTCAAGGTTATTCTTTAAAAAGCTTCAAGACAATTACAAGTATATTAAAGATTTAGCTTCATGGTTATTTTTTGAACGATCTCGGTTTTTCTCTGAGAGGTTCGTGATGCATGATCTCTTGCATGACTTGGCAATATTCCTTGCTGGAGACTTCTATTGTAAAATAGAAGAACTTGGTGAACAAGAAAGAAAGAAGGTTCTCACTCGTCATTTGTCACATTTGCGAGGTGGAAGCTTAGATCATCCAATCTCAAAAGTCTTCAAGTCCATCGTGAAGTCAGAATCTTTGAGGACATCTTTGTATGTCGATGATTTGTTAAGCAAGAAAAGCAGAGCAACAAAGTTGAAATACTTGAGAGTTTTATCCTTTGATAAACTTGATGTATTACCAGATTCAATAGGTGAATTGATTCATCTACGCTATTTGAATCTCTCTCAGACCGATGTTAAGACATTACCAGAGTCACTATGCAACTTGTATAATCTACAAACATTAATATTGTATGCATGTTATAAGCTGACCATGTTGCCCAATGACATGCATAAACTTGTGAATTTACGGCATCTTGATCTTAGGGGAACTTCTTTGGAAGAAATGACTAGAGGAATAAGTAAATTGAAACACAAGCCTATTTTAGATTACTTTGCGGTGGGCAAGCACGAAGACAATGGAATACAGGAATTAGGAGGGCTCCCAAATCTTGAAGGATCATTTGAGATTAAGAAGTTGGAGAATGTTGTTGATGCGAGACAAGCAAGGAGTGCAAGGATGTTGGAGAAGAACCACATTGACAAGTTATCGTTGGAATGGTCTTCAGGTAGTGAGATGGTTTCCAACATAGAGACTGAGAGAGATATACTCGATGACTTGCAACCGCACAATGGCTTGAAAGAGTTGAGAATGAAGGGATACAAGGGCGAAACATTTCCAGTTTGGGTGGGGGACTGTTCCTACAACAATATGACAAGCGTAACACTAGCATCTTGCAAGAATTGCTGCATGCTACCTTCACTTGGACAGCTGCCATCTCTTAAGTACCTGAGCATTAAAGGTTTGGATCAGCTGAGGATTATTGGCGAAGAGTTTTACAATAATGACAGCGGTCATCATTCTTCGCCTATTGCACCGTTTCCTTCACTCGAGGAATTGGTGTTTGCTAACATGCCATGCTGGGAGGAGTGGCACGTACCTCACCCAGAAGCTTTTCCTCGGCTTAGGAAACTTCGAATAAAAGAGTGTCCAACGTTAAAGGGAGATATGCTTAATGCCATATCCTTGAGAATGGTTTCTTCTTTGTCGGATGCTTCCGAAGTTCGCAAGCTGGAAATACGGGGAGATCATGAAGAAAGGTATGATGAGATGCTATATCGGGATACTTTATCAATTGGGGGATGTGAATCCGCAGTGAAGTCTGCATTAAACCTTCTACATCATTATTGA 2832 0.4078 MASVVGGAFLSGFISIVINKSLREDAVNQVFGKKLGPGLVERLKISLLAAEAVLDDAEYKQLGDDRVRDWLNCLRDSVYDADDFLDAVHTKAATQKEVRSSKLSFFRNRHRKMVDNMEEVVARIEFLVKQKDDLGLQKSTKDNNLSSSSSSSWRETTCLMQGKIYGREDDQQALTKIIKDNSESQLSVIPIVGMGGVGKTTLAKWVYNFTEGFDDDKKVWVCISETFDVAEITKKTIEEITKTPCTLGSLNSLQNELKKNLSGKKFFIVLDDVWSEDADKWEQFITPFHYGAKGSTILLTTRNQEVASVVHTCPSYILNGLSEESCWLLFAANACFPVSNGNRKLEDVGRKIVKRCKGLPLAVETLGRLLRGKDDVKEWNAVLRSDIWEYSTKNSKIIPALLISYFQLPPYLKRCFVYCSLFPKDHRFEKNELVLLWMAEDLLRVPKRGESLEEVGSQCFEELASRLFFKKLQDNYKYIKDLASWLFFERSRFFSERFVMHDLLHDLAIFLAGDFYCKIEELGEQERKKVLTRHLSHLRGGSLDHPISKVFKSIVKSESLRTSLYVDDLLSKKSRATKLKYLRVLSFDKLDVLPDSIGELIHLRYLNLSQTDVKTLPESLCNLYNLQTLILYACYKLTMLPNDMHKLVNLRHLDLRGTSLEEMTRGISKLKHKPILDYFAVGKHEDNGIQELGGLPNLEGSFEIKKLENVVDARQARSARMLEKNHIDKLSLEWSSGSEMVSNIETERDILDDLQPHNGLKELRMKGYKGETFPVWVGDCSYNNMTSVTLASCKNCCMLPSLGQLPSLKYLSIKGLDQLRIIGEEFYNNDSGHHSSPIAPFPSLEELVFANMPCWEEWHVPHPEAFPRLRKLRIKECPTLKGDMLNAISLRMVSSLSDASEVRKLEIRGDHEERYDEMLYRDTLSIGGCESAVKSALNLLHHY* 944
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0090 943 Gene3D - 33 125 - -
Ahy12g0090 943 Pfam Rx N-terminal domain 38 103 IPR041118 -
Ahy12g0090 943 SMART LRR_typ_2 647 670 IPR003591 -
Ahy12g0090 943 SMART LRR_typ_2 600 623 IPR003591 -
Ahy12g0090 943 Gene3D - 320 403 IPR042197 -
Ahy12g0090 943 Gene3D - 404 509 IPR036388 -
Ahy12g0090 943 PANTHER OS05G0414200 PROTEIN 39 889 - -
Ahy12g0090 943 PANTHER DISEASE RESISTANCE PROTEIN RP 39 889 IPR044974 GO:0006952
Ahy12g0090 943 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 159 419 IPR027417 -
Ahy12g0090 943 PRINTS Disease resistance protein signature 260 274 - -
Ahy12g0090 943 PRINTS Disease resistance protein signature 356 370 - -
Ahy12g0090 943 PRINTS Disease resistance protein signature 803 819 - -
Ahy12g0090 943 PRINTS Disease resistance protein signature 188 203 - -
Ahy12g0090 943 Pfam NB-ARC domain 169 384 IPR002182 GO:0043531
Ahy12g0090 943 Gene3D Ribonuclease Inhibitor 545 929 IPR032675 -
Ahy12g0090 943 SUPERFAMILY L domain-like 499 885 - -
Ahy12g0090 943 Gene3D - 148 317 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0090 Ahy-Chr12 1898501 1907831 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g0090 186 373 WRKY Transcription Factor Family AT5G45050 29.744 2.20e-11 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0090 - - ahf:112726295 1878.22