Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0088 ATGGCTGGTGCACTTGTTGCTGGAGCTTTGCTCTCTGGATTCATTAACATTGTCATTAACAAATCCCTTAGAGAGGATGTGGTCAACCGGGTCTTGGGCAAGAAACTTGGCCCTGGCTTGGTTGAGAGGCTGAAAATTTCTCTGCATGCTGCTGAAGCTGTGCTTGATGATGCTGAGTACAAGCAACTGGGTGACGAACGCGTGAGGGATTGGCTCAACAGTCTGAGAGATGCTGTTTATGATGCTGATGACTTTCTGGATTCTGTACTCACCAAAGCCGCCACTCAAAAGGAGGTATGTTCTTTCTTGCCTAGTTTCTTTCTCAACCGATATAGGAAGATGGTAGATAACATGGAAGGGGTGGTTGCAAGAATAGAATTTCTTGTAAGTCAAAAAGATATCCTTGGTCTTCAAAAGAATACCAAGGATAATAACCTGTCATCATCATCATCATCATCATCATCATGGCGAGAAACCACATGTCTGATGGAAGGGAACATATATGGCAGGGAGGATGATCAACAAGCTTTAATCAAAATAATAAATGACAACAGTGAATCTCAGTTATCTGTGATTCCAATTGTTGGCATGGGTGGGGTTGGTAAAACAACCTTAGCCAAATGGGCGTACAGTGTCGCGGAGGGATTTGATCTCAAAGCATGGATCTGCATCTCTGAAACATTTGATGTTGCTGAGATTACAAGGAAAACCGTGGAGGAAATTACTAAAAGTTCTTGTGACCTTCGGAGTTTAAATTTGCTTCAAAATGAATTGCAGGAAATCTTGTCGGGAAAGAAGTGCTTTATTGTTCTAGACGATGTCTGGAGCGAAGATGCCGATAAGTGGAAGCAATTTATAACTCCTTTTCAAGGTGGGGCTAAGGGTAGTACAATTCTTCTAACAACTCGCAATCAAGAGGTTGCTTCAGTAGTTCAAACATGTCCCTCTTGCACTCTTAATGAGTTGTCCGAAGAGTCTTGTTGGTTATTGTTTGCAGCCAATGCATGTTTTCCGGTGTTAAACAGGAACCCAACACTAGAGGATGTCGGTAGAAAGATTGTCAAGAAGTGTAAGGGGTTGCCATTAGCTGTAGAAACACTTGGGCGTTTGTTGCAAGGAAAGGATGATGTTAAAGAATGGAATGTTGTTTTAATGAATGACATTTGGGAATTGAAAAATAGTAAAATTATTCCAGCATTGTTAATAAGCTACTTCCAGCTACCTCCTTACTTGAAGCGTTGTTTCGTTTATTGTTCATTGTTCCCCAAAGATTACTATTTTGATAAACTCAAACTAATTTTGCTGTGGATGGCTGAAGATCTTTTAAGGCCACCAAAGAGAGGAGAGAGTTTAGAAGAGGTTGGTTCTCAGTGTTTTGAAGAGTTAGCTTCAAGGTTATTTTTTAAACCAGCTGCTAAGGATTTTCCCGAGAATTACGTGATGCATGATCTCTTGCATGACTTGGCAGTATTCCTTGCTGGAGACTTCTATTGTAGAATAGAAGAGTTTGGTGAACAAGAAGAGAAGAAGGTTCTCATTCGTCATTTGTCACATTTGACATATGGAAGCTTAGTTCATCCAATCTCAAAAGCTTTTAAATTCATTGTGAAATCAGAATCTTTGAGGACATCTTTGTATATCGATGATTTGTTAAGCCTGAAAAGCAGAGCATCAAAGTTGAAATACTTGAGAGTTTTATCCTTTAGTAAACTTGATGTATTACCAGATTCAATAGGTAAATTGATTCATCTACGCTATTTGAATCTCTTTAGGACCAATGTTAAGACATTACCAGAGTCATTATGCAACTTGTATAATCTACAAACATTAATATTGTATGAATGTTCTAAACTGGCCATGTTGCCCGATGGCATGCATAAACTCGTGAAATTACGGCATCTTCTCCTTGGTGGAACTTGTTTGAAAGAAATGCCTAGAGGAATAAGTAAATTGAAACACATGCATATTTTAGATTACTTTGTGGTGGGCAAGCACAAAGACAATGGAATCCAGGAATTAGGAGGGCTCTCAAATCTTGAAGGATTATTTGAGATTAGGAAGTTGGAGAATGTTGCTGATGTCAGACAAGCCAGGAGTGCAAGGATGTTGGAGAAGGACCGCATTGACAAGTTATTGTTGGAATGGTCTTGGGATCATGAGATGGTTTCAAACACAGAGACTGAGAGAGATATACTCGACGGCTTGCAACCGCACAATGGCTTGAAAGAGTTGAAAATCATGGGATACAAGGGCGAAAGATTTCCAGATTGGGTGGGGCACTCTTCTTACAACAATATGACAACTGTATGGCTATCTTGCAAGAATTGCTGCATGCTGCCTTCACTTGGACAGCTGCCATCTCTAAAGTCCCTGCGCATTGAAGGTTTTCTTGAGCTCAAGCGTATTGGTGATGAGTTTTACAAGAGTGACAGCCATCATGATTCTTCGCCTACTGCACCGTTTCCCTCACTGGAGACGTTGGAATTTCATAAGATGCCATGCTGGGAGGAGTGGCACGTACCTGACCCAGAAGCTTTTCCTCAGCTTAAGATACTTCGAATAGAACGTTGTCCAATGTTCAAGGGAGATATGCTTAATGGCATATTCAGGAGAAGGGTTTCTTGTTTGTCGGATGTTTCGAAAGTAGAAATGCGGGAAGATGATGAAGCTGGTGGGGATGATTTATCAATAAGGGGATCTCAATCATTTAATGCAAGGACGATCAACCATCTGTGTTGCCTCCAAGAACTACGTATTTCAGGGTGTCCGTCAATTGTATCCTTTCCGGGTAATTGTATTCCCAAATCTTTGCAAAAGCTGAAACTCTGCAAGTGTAGTAAACTAGAATTCCCGGAGCAACAGCAGCACAAGTATGATTTGGTAGAGCTACAAATAGAAGAGAGCTGTGATTCACTGACCTCCTTGTCGTTGGATGTCTTTCCCAATCTCAAGAATTTGGAGATATTCAGTTGTAGGAATCTGGAATCAGTGTCAATTTCAGATCCACCACACGCTGCTCTTCAACGTCTCATATTCAGGAGGTGCTCCAATTTAGTGTCATTTGCAGGAGGACTGGCTGCACCCAACTTGACTCAGCTCACCATCTTTGATTGTCCGGAGTTAGTCTCATTTGCAGGAGAAGGAGTGGCTGCACCCAACTTGACTCATCTCGGCCTCTCAAAATGCGACAAGTTGGAGGCATTACCACGTGATATGAAGAGTCTACTCCCAAGTTTACACTCTCTCCTGATATCTGGCTCAGATATGTGCTGGATGGCGGAGGGTGGTTTACCGCCAAACTTGAAATCACTTTTTGTGGGAACTAGCGAGCAACAAATGAGGGATCTATCATGGATGGGCAACTTGCACGCCCTCACTCATCTTACCATTTATGGTTCTTACTGCGACAACATAAAGTCATACCCAGAGGTGGGTTCATTGCCTCACCTTCCCTCCCTTACCACTCTACATATCAAAGAGTTTGATAATCTGGAGACATTGGAGTGCAACGAGCTTCTCCGCCTCACCTCCCTTCAACAACTACATATTAATTCGTGTCCAAGGCTGGAGAATATGGAAGGAGAAAAGCTGCCTCCCTCTCTCTTGCTACTCAAAATGGAATACTGTGGTTTGCTGGGAGAACACTGCAAGAATAAGCATCAACTAATCTGGCCCAAAATTTCCCACATCCCCACCATTCAAGTTGATGACAAACAAATTTTCTGA 3726 0.4184 MAGALVAGALLSGFINIVINKSLREDVVNRVLGKKLGPGLVERLKISLHAAEAVLDDAEYKQLGDERVRDWLNSLRDAVYDADDFLDSVLTKAATQKEVCSFLPSFFLNRYRKMVDNMEGVVARIEFLVSQKDILGLQKNTKDNNLSSSSSSSSSWRETTCLMEGNIYGREDDQQALIKIINDNSESQLSVIPIVGMGGVGKTTLAKWAYSVAEGFDLKAWICISETFDVAEITRKTVEEITKSSCDLRSLNLLQNELQEILSGKKCFIVLDDVWSEDADKWKQFITPFQGGAKGSTILLTTRNQEVASVVQTCPSCTLNELSEESCWLLFAANACFPVLNRNPTLEDVGRKIVKKCKGLPLAVETLGRLLQGKDDVKEWNVVLMNDIWELKNSKIIPALLISYFQLPPYLKRCFVYCSLFPKDYYFDKLKLILLWMAEDLLRPPKRGESLEEVGSQCFEELASRLFFKPAAKDFPENYVMHDLLHDLAVFLAGDFYCRIEEFGEQEEKKVLIRHLSHLTYGSLVHPISKAFKFIVKSESLRTSLYIDDLLSLKSRASKLKYLRVLSFSKLDVLPDSIGKLIHLRYLNLFRTNVKTLPESLCNLYNLQTLILYECSKLAMLPDGMHKLVKLRHLLLGGTCLKEMPRGISKLKHMHILDYFVVGKHKDNGIQELGGLSNLEGLFEIRKLENVADVRQARSARMLEKDRIDKLLLEWSWDHEMVSNTETERDILDGLQPHNGLKELKIMGYKGERFPDWVGHSSYNNMTTVWLSCKNCCMLPSLGQLPSLKSLRIEGFLELKRIGDEFYKSDSHHDSSPTAPFPSLETLEFHKMPCWEEWHVPDPEAFPQLKILRIERCPMFKGDMLNGIFRRRVSCLSDVSKVEMREDDEAGGDDLSIRGSQSFNARTINHLCCLQELRISGCPSIVSFPGNCIPKSLQKLKLCKCSKLEFPEQQQHKYDLVELQIEESCDSLTSLSLDVFPNLKNLEIFSCRNLESVSISDPPHAALQRLIFRRCSNLVSFAGGLAAPNLTQLTIFDCPELVSFAGEGVAAPNLTHLGLSKCDKLEALPRDMKSLLPSLHSLLISGSDMCWMAEGGLPPNLKSLFVGTSEQQMRDLSWMGNLHALTHLTIYGSYCDNIKSYPEVGSLPHLPSLTTLHIKEFDNLETLECNELLRLTSLQQLHINSCPRLENMEGEKLPPSLLLLKMEYCGLLGEHCKNKHQLIWPKISHIPTIQVDDKQIF* 1242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0088 1241 Pfam NB-ARC domain 171 384 IPR002182 GO:0043531
Ahy12g0088 1241 Coils Coil 41 61 - -
Ahy12g0088 1241 PANTHER OS05G0414200 PROTEIN 40 928 - -
Ahy12g0088 1241 Gene3D - 321 402 IPR042197 -
Ahy12g0088 1241 SUPERFAMILY L domain-like 480 860 - -
Ahy12g0088 1241 CDD RX-CC_like 13 107 IPR038005 -
Ahy12g0088 1241 Gene3D - 152 316 IPR027417 -
Ahy12g0088 1241 Gene3D - 30 125 - -
Ahy12g0088 1241 SUPERFAMILY L domain-like 902 1228 - -
Ahy12g0088 1241 PRINTS Disease resistance protein signature 261 275 - -
Ahy12g0088 1241 PRINTS Disease resistance protein signature 191 206 - -
Ahy12g0088 1241 PRINTS Disease resistance protein signature 602 618 - -
Ahy12g0088 1241 PRINTS Disease resistance protein signature 357 371 - -
Ahy12g0088 1241 PANTHER DISEASE RESISTANCE PROTEIN RP 40 928 IPR044974 GO:0006952
Ahy12g0088 1241 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 157 418 IPR027417 -
Ahy12g0088 1241 Pfam Rx N-terminal domain 41 98 IPR041118 -
Ahy12g0088 1241 Gene3D Ribonuclease Inhibitor 528 697 IPR032675 -
Ahy12g0088 1241 Gene3D Ribonuclease Inhibitor 1049 1221 IPR032675 -
Ahy12g0088 1241 Gene3D Ribonuclease Inhibitor 702 869 IPR032675 -
Ahy12g0088 1241 Gene3D Ribonuclease Inhibitor 894 1047 IPR032675 -
Ahy12g0088 1241 Gene3D - 403 490 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0088 Ahy-Chr12 1869014 1874219 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g0088 192 421 WRKY Transcription Factor Family AT5G45050 26.695 6.21e-10 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0088 - - ahf:112726314 1916.74