Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0083 ATGGCTGTTGCAGTTGTTGGTGGAGCTTTGCTTAACGTTGTCTTTGAAAGGTTGCTCACAAAGGATACGGTCAACTTGGTCTTGGGCAAGAAGCTTGGCTCTGACTTGCTTGAAAAGCTGAAGATTTCACTGCTTGCTGCTGAAGCTTTGCTTGATGATGCTGAGTACAAGCAACTGGGCGACGATCGTGTGAGGGATTGGCTCAACCGTCTGAGAGATGCTGTTTATGATGCTGATGACTTTCTGTACGCTGTACTCACCAAAGCCGCCACTCAAAAGGAGGTACGTTCTTTGTTGCCTAGTTGCTTCCGTAACCGACATAGGAAGATGGTAGATAACATGGAAGACGTGGTTACAAGAATAGATATTCTTGTAAGTAAAAAAGATATTCTTGGACTTCAACAGAGTACCAAGGATAATAACTTGTCATCATCATCATCATCATCATCAAAATGGCGAGAAACCACATGTCTGATGGAAGGGAAAATATATGGCAGGGAGGATGATCAACAAGCTTTAACCAAAATAATAGAAGACAACAGTGAATCTCAGTTATCTGTGATTCCTATTGTTGGCATGGGCGGGGTTGGTAAAACAACCTTAGCCAAATGGGCGTACAGTGTCGCAGAAGGATTTGATCTCAAAGCATGGGTCTGCATCTCTGAAACATTTGATGTTGCTGATATTACAAAGAAAACCATTGAGGACATTACTAAAAATTCTTGTGCCCTCGGGACTTTAAATTTGCTACAAAATAAACTGCAGGAAGTCTTGTCAGGAAAGAAGTTCTTTATTGTTCTAGACGATGTCTGGAGCGATGATGCCGATGAGTGGAAGCAATTTATAACTCCTTTTCACTGTGGGGCTCAGGGTAGTTCAATTCTTCTTACAACTCGTATGAAAGAGGTTGCCTCAGTAGTTAAAACATGTTCCTCTCACTTTCTTAACGAGTTGTTAGAAGAGTACTGTTGGTCATTGTTTAAAGACAATGCATGTTTTCTGGAGTCCAACGGGAACCCAACACTAGTTGATGTCGGTAGACAAATTGTCAACAAGTGTAAGGGCTTGCCATTAGCTGTAGAAACACTTGGCCGCATGTTGCAAGGAAAGAACGATGCTGAAGAATGGAAAGCTGTTTTAAGGAGTGCCATCTGGGACTTTCCTATGAAAAATTGTAAAATTATTCCAGCATTGTTAATAAGCTACTTCCAGCTACCTCCTTACTTGAAGTGTTGTTTTGTTTATTGTTCCTTGTTTCCCAAAGATCATTACTTTGAGAAAAATGAACTAGTTTTGCTGTGGATGGCTGAAGATCTTTTAAGGCTGCAAAAGATGATTTGTTAA 1344 0.4085 MAVAVVGGALLNVVFERLLTKDTVNLVLGKKLGSDLLEKLKISLLAAEALLDDAEYKQLGDDRVRDWLNRLRDAVYDADDFLYAVLTKAATQKEVRSLLPSCFRNRHRKMVDNMEDVVTRIDILVSKKDILGLQQSTKDNNLSSSSSSSSKWRETTCLMEGKIYGREDDQQALTKIIEDNSESQLSVIPIVGMGGVGKTTLAKWAYSVAEGFDLKAWVCISETFDVADITKKTIEDITKNSCALGTLNLLQNKLQEVLSGKKFFIVLDDVWSDDADEWKQFITPFHCGAQGSSILLTTRMKEVASVVKTCSSHFLNELLEEYCWSLFKDNACFLESNGNPTLVDVGRQIVNKCKGLPLAVETLGRMLQGKNDAEEWKAVLRSAIWDFPMKNCKIIPALLISYFQLPPYLKCCFVYCSLFPKDHYFEKNELVLLWMAEDLLRLQKMIC* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0083 447 PRINTS Disease resistance protein signature 257 271 - -
Ahy12g0083 447 PRINTS Disease resistance protein signature 353 367 - -
Ahy12g0083 447 PRINTS Disease resistance protein signature 187 202 - -
Ahy12g0083 447 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 416 IPR027417 -
Ahy12g0083 447 Coils Coil 37 57 - -
Ahy12g0083 447 PANTHER OS05G0414200 PROTEIN 30 443 - -
Ahy12g0083 447 Pfam NB-ARC domain 169 381 IPR002182 GO:0043531
Ahy12g0083 447 Gene3D - 11 153 - -
Ahy12g0083 447 Pfam Rx N-terminal domain 10 103 IPR041118 -
Ahy12g0083 447 Gene3D - 401 445 IPR036388 -
Ahy12g0083 447 Gene3D - 317 400 IPR042197 -
Ahy12g0083 447 PANTHER DISEASE RESISTANCE PROTEIN RP 30 443 IPR044974 GO:0006952
Ahy12g0083 447 Gene3D - 154 313 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0083 Ahy-Chr12 1844616 1846781 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g0083 188 377 WRKY Transcription Factor Family AT5G45050 29.442 6.84e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0083 - - ahf:112729050 712.99