Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0078 ATGCCACTCTCTTACACTCTCTTCTTCTTCTTCTTCCTTCAACGCATTCTAACCTTCACCATTGCAACCTCTTCCACCACCATTATTCTAGAAGGAAGCACCACACTCCGAAGCCCAAACAACACCTTCGAACTCGGAATCTTCAACTTGCCATCTTCCAACAACTTCTACCTCGCAATCCGCTACGCTTCACTCTCAAAACAAACCCTCATTTGGGTCGCTAACCGCCGTCAACCCTCCCCAACCCAAACCAATACCACCCTTCAGCTCACCAACACCACCACCACGTGCCACCTCAGCCTCACTCACCCCCAAACCTCACTACCTCTATGGCAAACCCCAACTCCAAAAGGCCCTTCCTTTTCTTCTTGCAATGTTCAGTTACTGGAAAATGGAAACTTGGTTCTTCTCTCTTCCGAAAATGGCACCGTTTTGTGGCAGAGCTTCGACGAACCAACTGACAAGTGGCTTCCGGGTATGAACTTGACCCGAACCCAATCTCTTGTTTCGTGGAAAACCGAAACGGACCCTTCGCCGGGGCTTTACTCTCTGCGGCTGAAACCACCGGATTACGGTGAGCTTGAGCTTGTTTTCAACGGCACCGATTCGTACTGGTCCACCGGAAACTGGACCGGTAATTTTTTCACCGGAATTCCTGAGATGACGAATCCGTACATTTACCGGTTCCATTTCGAGGAGCCTTTTACTGCAGCTGCGTCGTTTGGGTTCACAGAGACGACTTCGGATAGTGGCTTTGTTCCGACGATGTTCCGTTTGGAGCCTCACGGTCAGGTTCAGCAGTACACGTGGTGGAAGCAGGCTGGTGCGTGGAACAAGTTTTGGTTCAAGCCTGAGGTTTGTCAGGTTCGGGGGCTTTGTGGGAGGTTCGGAGTTTGCAAAGGTCATGAAAGTTCTGAACTTTGTGTTTGTGTTGATGGGTTTGGGCCTTCTGATGAAGTGGGTTGGGGGAATGGGGATTACACTATGGGTTGTGTTCGTAAAAAAATGGATTCTTGTGATAAAAGGGATGGTTTTCAGGATATGGGGTTGGTGAAATTTGGATCTGGTAGTGTGAATTTTTCGAAAGCTAAGTCTAGGAGCTTTTGTGAGAGTAAATGTTTGGGATCTTGTGAGTGTGTTGGGTTAACTTTTAGTGAAGGGAGTGGTTTGTGTAAGAACTTTTATGGTTCAGTGTTTGATTTTCAGAATGTGAGTTCTGTTGGTCTTGGTGTTGGTGATGGTGGTGGTGCCTTGTATGTGAGGGTGCCAAGAGATGGGAATGAGAAGGGTTTGGATAGTAAAGTTTTGATTGTTGCTGTCCTTGTTGGGTCGGTGGCAGTTTTGGGTGTTGTGGTGGTGACTTTGTTGGTGTTGGTGAAGAAGAAGAGGAAGAAGGAGTTGGAGGAGGAAGATAGATTTATTCAAATGTTGAATTTGAGGATGTTTTCTTACAAGGAGCTTCAATTGGCAACAAGGGGTTTTTCGGAGAAAGTTGGGCATGGTGGATTTGGGACTGTATTTCAAGGTGAATTGAGTGATTCAACTCTTGTTGCTGTGAAGAGGTTGGAGAGGCCAGGGAGTGGGGAGAAAGAGTTCAGGGCCGAGGTTTCGACAATTGGGAACATTCAGCATGTTAATCTTGTGAGGCTTAGAGGCTTTTGTTCTGAGAATGCTCATAGGCTTTTGGTTTATGAGTTCATGCAAAATGGCGCATTGAGCGCTTATCTGCGCAGGGAAGGGCCTAGTTTGAGCTGGGATGTTAGATTTCGAGTTGCAGTTGGAACAGCCAAAGGGATTGCATATTTACATGAGGAGTGTAGGAACTGCATTATACATTGTGATATCAAACCTGAGAATATCCTTTTGGATAGTGGTTTCAATGCAAAGGTTTCGGATTTCGGTTTGGCAAAGCTCATGGGGAGGGATTTCAGTAGGGTGTTGGCAACCATGAGGGGTACTTGGGGGTATGTTGCTCCGGAGTGGATTTCCGGGGTGGCAATTACTGCGAAGGCTGATGTTTATAGTTATGGAATGACATTGCTTGAACTAATTGGTGGTCGCCGAAACATTGAGACACTGCCATCTGCTGGTGGTTGTGACAGAGGCAAAGAGAGTGGTTGTGAGATGGGAGAGAGATGGTTCTTTCCTCCTTGGGCGGCACGGCAGATAATCGACGGCAATGTGGCCTCCGTGATCGATAAGAAACTTGGAGATGCATATAACATTGAGGAGGCTAGAAGGGTTAGTTTGGTAGCAGTTTGGTGCATTCAAGATGATGAAGCTATTAGGCCTACAATGGATATGGTGGTGAAAATGTTGAAAGGGTTAGTGGAAATTAGGGATCCTCCACTGCCGAATTTGCTACAAGCATTGGTTACCGGCGAGTCCTTTCAAGGCGTCAAGTCTGATTCAGGCAATGAGATTTCCACCGGCGGAGGCTTATCCGGCGGCAACTTGGAAGTGTCAATTGCTGATTCAGAATCATATGTTGGAGATGCATTTCCCTCCCCAATGGATGTGAATGTCAATGTTGATGTTAGATAA 2544 0.4686 MPLSYTLFFFFFLQRILTFTIATSSTTIILEGSTTLRSPNNTFELGIFNLPSSNNFYLAIRYASLSKQTLIWVANRRQPSPTQTNTTLQLTNTTTTCHLSLTHPQTSLPLWQTPTPKGPSFSSCNVQLLENGNLVLLSSENGTVLWQSFDEPTDKWLPGMNLTRTQSLVSWKTETDPSPGLYSLRLKPPDYGELELVFNGTDSYWSTGNWTGNFFTGIPEMTNPYIYRFHFEEPFTAAASFGFTETTSDSGFVPTMFRLEPHGQVQQYTWWKQAGAWNKFWFKPEVCQVRGLCGRFGVCKGHESSELCVCVDGFGPSDEVGWGNGDYTMGCVRKKMDSCDKRDGFQDMGLVKFGSGSVNFSKAKSRSFCESKCLGSCECVGLTFSEGSGLCKNFYGSVFDFQNVSSVGLGVGDGGGALYVRVPRDGNEKGLDSKVLIVAVLVGSVAVLGVVVVTLLVLVKKKRKKELEEEDRFIQMLNLRMFSYKELQLATRGFSEKVGHGGFGTVFQGELSDSTLVAVKRLERPGSGEKEFRAEVSTIGNIQHVNLVRLRGFCSENAHRLLVYEFMQNGALSAYLRREGPSLSWDVRFRVAVGTAKGIAYLHEECRNCIIHCDIKPENILLDSGFNAKVSDFGLAKLMGRDFSRVLATMRGTWGYVAPEWISGVAITAKADVYSYGMTLLELIGGRRNIETLPSAGGCDRGKESGCEMGERWFFPPWAARQIIDGNVASVIDKKLGDAYNIEEARRVSLVAVWCIQDDEAIRPTMDMVVKMLKGLVEIRDPPLPNLLQALVTGESFQGVKSDSGNEISTGGGLSGGNLEVSIADSESYVGDAFPSPMDVNVNVDVR* 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0078 847 ProSiteProfiles Protein kinase domain profile. 492 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy12g0078 847 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 9 832 - -
Ahy12g0078 847 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-2 9 832 - -
Ahy12g0078 847 SMART serkin_6 492 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy12g0078 847 Gene3D Transferase(Phosphotransferase) domain 1 567 781 - -
Ahy12g0078 847 CDD B_lectin 29 152 IPR001480 -
Ahy12g0078 847 ProSitePatterns Protein kinases ATP-binding region signature. 498 520 IPR017441 GO:0005524
Ahy12g0078 847 PIRSF SRK 1 828 IPR024171 GO:0004674
Ahy12g0078 847 ProSiteProfiles Bulb-type lectin domain profile. 21 149 IPR001480 -
Ahy12g0078 847 Pfam D-mannose binding lectin 69 167 IPR001480 -
Ahy12g0078 847 ProSiteProfiles PAN/Apple domain profile. 339 405 IPR003609 -
Ahy12g0078 847 Pfam Protein kinase domain 495 691 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy12g0078 847 ProSitePatterns Serine/Threonine protein kinases active-site signature. 610 622 IPR008271 GO:0004672|GO:0006468
Ahy12g0078 847 SUPERFAMILY Protein kinase-like (PK-like) 472 773 IPR011009 -
Ahy12g0078 847 SUPERFAMILY alpha-D-mannose-specific plant lectins 55 210 IPR036426 -
Ahy12g0078 847 CDD STKc_IRAK 498 776 - -
Ahy12g0078 847 Gene3D Phosphorylase Kinase; domain 1 454 566 - -
Ahy12g0078 847 Gene3D - 22 149 IPR036426 -
Ahy12g0078 847 Pfam S-locus glycoprotein domain 205 317 IPR000858 GO:0048544
Ahy12g0078 847 SMART blect_4 27 152 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0078 Ahy-Chr12 1814479 1817562 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g0078 482 783 Receptor kinase-like Gene Family AT5G20050 43.492 7.22e-77 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Ahy12g0078 Pkinase 1.60E-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0078 - - gmx:100778917 1102.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0078 12 1814479 1817562 Ahy2g0041 2 452305 455488 hybridization