Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0060 ATGGAGGAAGGAAGAGATATAGATCCAAGAAGTGGGTTCTGCAGCTCAAACTCAGTCTTCTACAGCAAAAGGAAGCCACTTCCACTTCCACAGAACCCATCCTTGGACGTCACCACCTTCATCTCATCACACGCCCACCATGCCAGGATCGCCTTCATCGACGCCGCCACCGGCAACCACTTCACCTTCCACCAACTCTGGCGAGCTGTGGACGCCGTCGCCTCCTCCCTCTACGACCTCGGCATCCGCAAGGGCAACGTCGTCCTCCTCCTCTCCCCAAACAGCATCTACTTCCCCGTCGTCTGCCTCGCCGTCATGTCCCTCGGCGCCATCATCACCACCACCAACCCTCTCAACACCGCCGCCGAAATCCGCAAGCAAATCAACGACTCCAAGCCTCGCATCGCCTTCACCATCCCTCCCCTGGCCTCGAAAATCGCCGCCGCCTCCCCCTCGCTCCCGATCATCCTCATGGAGGCCGACACCAGCAGCAGCTTCCCTTCAGCCGTCACCACCCTGAGCCGCATGATGGAGAAAGAAAGCAGCTCAAGCCGAGTCAAAGAGCGAGTCAACCAGGACGACACGGCCACCCTGCTCTACTCTTCCGGCACCACCGGGCCCAGCAAGGGCGTCGTGTCTTCTCACCGCAACCTCATGGCTATGGTGCAGATCGTTCTCGGCAGATTCAACATCGAGGATAGCCAGACCTTCATCTGCACTGTCCCGATGTTCCATATATACGGGCTGGTGGCGTTTGCGACGGGACTTCTGGCGGCGGGGGCCACAATCGTGGTGCTGTCAAAGTTCGAGATGCACGACATGTTGTCGGCGATAGAGAGGTACAAGGCGACGTACCTGCCGCTGGTGCCGCCGATTCTGGTAGCGATGCTCAACAACGCCGACGCGATTAAGGGGAAGTACGATTTGAGGTCTTTGCATTCGGTGCTTTCGGGTGGAGCTCCGCTGAGTAAAGAGGTGATAGAAGGCTTCGTGGAGAAGTATCCGAACGTGACCATTCTTCAGGGTTATGGCTTGACGGAGTCCACCGGAGTTGGTGCTTCCACCGACTCCTTGGAAGAGAGCCGCAGGTACGGTACGGCGGGGCTCCTCTCTCCTGGAACCCAGGCTAAGATTGTCGACCCTGACTCCGGGCTCGCCCTTCCCGTGAACCGGACCGGTGAGCTCTGGCTCAGGGGTCCCACCATCATGAAAGGTTATTTCAGTAACGAGGAAGCAACGGCGTCTACGCTTGATTCAGAAGGATGGTTAAGAACAGGGGATGTTTGCTTCATCGACAATGATGGCTTCATATTTATTGTGGATAGGTTGAAAGAGCTCATCAAGTACAAGGGATATCAGGTGCCTCCAGCAGAACTAGAGGCCTTGTTGCTCACACATCCAGACATTGCTGATGCTGCTGTCATTCCGTTTCCAGATAAGGAGGCTGGGCAGTTTCCAATGGCATATGTTGTAAGAAAGGCTGGAAGCAGCATTTCGGAGAAGGAAGTGATGGATTTTGTGGCAAAACAGGTGGCTCCATACAAGAGAATTAGAAAGGTCGCTTTTATATCTTCCGTACCCAAAAATCCATCTGGCAAGATTCTAAGGAGGGATCTCATCAACCTCGCAACCTCTAAACTCTGA 1644 0.5517 MEEGRDIDPRSGFCSSNSVFYSKRKPLPLPQNPSLDVTTFISSHAHHARIAFIDAATGNHFTFHQLWRAVDAVASSLYDLGIRKGNVVLLLSPNSIYFPVVCLAVMSLGAIITTTNPLNTAAEIRKQINDSKPRIAFTIPPLASKIAAASPSLPIILMEADTSSSFPSAVTTLSRMMEKESSSSRVKERVNQDDTATLLYSSGTTGPSKGVVSSHRNLMAMVQIVLGRFNIEDSQTFICTVPMFHIYGLVAFATGLLAAGATIVVLSKFEMHDMLSAIERYKATYLPLVPPILVAMLNNADAIKGKYDLRSLHSVLSGGAPLSKEVIEGFVEKYPNVTILQGYGLTESTGVGASTDSLEESRRYGTAGLLSPGTQAKIVDPDSGLALPVNRTGELWLRGPTIMKGYFSNEEATASTLDSEGWLRTGDVCFIDNDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPDIADAAVIPFPDKEAGQFPMAYVVRKAGSSISEKEVMDFVAKQVAPYKRIRKVAFISSVPKNPSGKILRRDLINLATSKL* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0060 547 Gene3D - 17 444 IPR042099 -
Ahy12g0060 547 PANTHER BNAA06G14440D PROTEIN 8 546 - -
Ahy12g0060 547 SUPERFAMILY Acetyl-CoA synthetase-like 44 543 - -
Ahy12g0060 547 ProSitePatterns Putative AMP-binding domain signature. 198 209 IPR020845 -
Ahy12g0060 547 Pfam AMP-binding enzyme 45 449 IPR000873 -
Ahy12g0060 547 Gene3D - 445 546 IPR045851 -
Ahy12g0060 547 Pfam AMP-binding enzyme C-terminal domain 458 533 IPR025110 -
Ahy12g0060 547 CDD 4CL 29 539 - -
Ahy12g0060 547 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 8 546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0060 Ahy-Chr12 1588763 1592338 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g0060 7 547 Monolignol Biosynthesis Gene Families AT1G20500 64.781 0.0 734