Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0055 ATGGCCATGGCTTCTTCTTGGAGTCCAAAGCATGAGAAGATGCAGAAGAGTTTGAGTACACAGTTAGCTGTGGCAGTAAGAAGTGTTCAATGGAGTTATGGAATTTTCTGGGCACCTTCAACAACCCAAGAAGGAGTGCTGGAATGGAGGGAAGGGTACTACAATGGAGACATTAAGACAATGAAGACAGTGCAAACAACAATGGAGATCAAGAATGACAAAATTGGAGTTCAGAGGAGTGAGCAGCTGAAGGAACTGTACAAGTTCCTTCTTGTTGGTGAATCTGATCCACAAACAAAAAGGCCTTCAGCTGCATTGTCTCCTGAGGATCTTTCAGATTCTGAGTGGTATTATTTGGTTTGCATGTCCTTTGTGTTCTATCCTAATCAAAGTTTGCCTGGTAGAGCACTAGAAATCGGCGAAACGATATGGTTATGCAATGCTCAATATGCAGATAGTAAAGTTTTCTCTCGTTCTTTACTTGCAAAGAGTGCATCAATTCAGACTGTAGTGTGCTTTCCCTATCTAGGGGGTGTTATTGAGATTGGTACAACTGAACTGGTGCTAGAGGACCCTAATCTTATTCAACATGTGAAGGCTTGTCTCTTGGAATTCTCAAAGCCTATTTGCTCTGATAAATCTTCATCAGCACTCAATAAGCCTGATGATGACAAACTTCAACCATGCTCCAATGGTGAACATGTTTTGGTTGACACAAAGGTTTTGGAGTACTCATGTTCCCCAGCTGAAGAAATCAAGCTTGATCAAGATCCTATCAAGGAACTACAACAAGATTCCAACATGGATTCTCCTGATGGATGTTCTAATGGTTGCGAGCACAACTGCCGTGTTGGAGAATCGATGGTTGAGGGAATCAATAATGGAGGGCCTTCTTCTCAAGTTCATTTCATGGATGATGATGATGCCTTGAGCAATGGTGCACCTGATTCCCTGAGTTCTTGTGATTGTATATCCGAGGCATCCGAGAACCGGGGAAAGGCTTCAAAGGATGTTCAACTAATCAGGGGAATTCAAAGCTTCAATCATTTGAATAGAAGTTCATTGGATGCAGAAGCAACTGATGAACACTTAAGCTACACAAGAATACTCTCTGCTCTTCTTGGGAGATCGTCGGCTTTCAAGCAGAATCCGTATGCTAGTAACTCAAATTGCAAATCGAGTTTCGTGAAATGGAAGAAAGGAGGAATCTGTGAGCAAAATCGGCTGCGGTTGGAGCAAAGCTTGTTGAAGAAGACTCTGTTTACTGTCCCTCTTATGCATAGGAGTTTCTCATCTATCGAATCAATGAAAGAAAATGAGACAAAAGAATGGACTAATAGATTGGAAAATGCTGATGACAAGTTCAGGGAAAATGTCTTATCTGATAAAATAAGAGAAACTGGAAACTTTAAGATTCTCAAGTCTTCAATTCCTCATCCTATAAGTGAGGTGGAGAAGATTTCGATCCTAGGCGACACAATTAAGTACTTGAAAGAGCTTGAGACAAGAGTGGAAGAACTAGAATCTTACATGGACATGTCGGATTCAGAAGCAAGAACCAAAAGAAAATGTCCAGATATGCTAGAGCAGATATCAGATAACTATGGAGCCAGAAAGGTTTACAATAAGGGAATGAGGAAGCCCTGGATGATGAACAAGAGAAAGGCTTGTGACATTGATGAAAAAGACAGAGAAGAAATAGACAGATTTGTTGTGTCTGAAGAAGATAATAATAAGCCATTGGATGTGAAGGTTAACATGAAGGAGCAAGAGGTTTTGATTGAGATGAAATGTCCTTATAGAGAATATATATTGCATGATATCATGGATGCTATTAACAATCTGCATTTGGATGCTCACTCAGTTGAGTCATCAACAACTGAAGGTGTTCTTACATTGACACTTAAATCCAAGTTTCGAGGCACAGCGACTGCGCCGCTGGGGATGATCAAAGAAGCACTCTGGAAAGTGTCTGGAAATCTATGA 1986 0.4079 MAMASSWSPKHEKMQKSLSTQLAVAVRSVQWSYGIFWAPSTTQEGVLEWREGYYNGDIKTMKTVQTTMEIKNDKIGVQRSEQLKELYKFLLVGESDPQTKRPSAALSPEDLSDSEWYYLVCMSFVFYPNQSLPGRALEIGETIWLCNAQYADSKVFSRSLLAKSASIQTVVCFPYLGGVIEIGTTELVLEDPNLIQHVKACLLEFSKPICSDKSSSALNKPDDDKLQPCSNGEHVLVDTKVLEYSCSPAEEIKLDQDPIKELQQDSNMDSPDGCSNGCEHNCRVGESMVEGINNGGPSSQVHFMDDDDALSNGAPDSLSSCDCISEASENRGKASKDVQLIRGIQSFNHLNRSSLDAEATDEHLSYTRILSALLGRSSAFKQNPYASNSNCKSSFVKWKKGGICEQNRLRLEQSLLKKTLFTVPLMHRSFSSIESMKENETKEWTNRLENADDKFRENVLSDKIRETGNFKILKSSIPHPISEVEKISILGDTIKYLKELETRVEELESYMDMSDSEARTKRKCPDMLEQISDNYGARKVYNKGMRKPWMMNKRKACDIDEKDREEIDRFVVSEEDNNKPLDVKVNMKEQEVLIEMKCPYREYILHDIMDAINNLHLDAHSVESSTTEGVLTLTLKSKFRGTATAPLGMIKEALWKVSGNL* 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0055 661 Gene3D - 462 531 IPR036638 GO:0046983
Ahy12g0055 661 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 469 514 IPR036638 GO:0046983
Ahy12g0055 661 PANTHER TRANSCRIPTION FACTOR TT8 10 659 - -
Ahy12g0055 661 PANTHER TRANSCRIPTION FACTOR MYC1 10 659 - -
Ahy12g0055 661 Coils Coil 497 517 - -
Ahy12g0055 661 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 18 201 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0055 Ahy-Chr12 1532965 1537625 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g0055 17 658 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G63650 39.275 1.13e-127 388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0055 - - adu:107472380 1295.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0055 12 1532965 1537625 Ahy12g0055 12 1532965 1537625 ECH
Ahy12g0055 12 1532965 1537625 Ahy2g0018 2 154649 159216 hybridization