Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0054 ATGTCATCAAAATCCAATAATAATAAAGCTTATTATTATGCTGATCTTCCAATTTTGGACATATCTCAGCCATTAGAAGAATCTTCATTAGAATCTCTCTCCAAAGCTTGCAAAGAATGGGGTTTTTTCCACATAATCAACCATGGAATCTCCAAAGATCTATGCAACCAGCTTCATTCACTGTCCAAATGTCTCTTCTCTCTCCCATCTGATACCAAGCTTAAGCTTGGGCCTTTCTCTAATGTCAAATCTTACACTCCACCCTTCATTGCTTCTCCATTCTTTGAGAGCCTCAGAGTTAATGGACCTGATTTTTATCTCTCTGCTAAGTCTTCTGAAGATGTTTTATTTCACAGAACCAATTCCAAATTCAGTGAAACTTTGCAAGAATATTGTAGCAAGATGGCAGAACTGTGTGAGAAGATTGTGAAGATTGTGTTGATGAGCATAGGTGAAGGATTTGAGAAAATGTTCTATGATGATGAATTCAGAAAGTGCCATGGATACTTAAGAATAAACAACTATTCAGCCCCAGAAGAAGAAAGAGAAGAAGTTGAAGGACTTGGAATGCACACAGACATGAGTTGCATAACAATCTTATACCAAGATGAAATTGGAGGGCTTCAAGTGAAGACAAATGATGGAGAATGGATTGACATAAAGCCTTCAGAGGGAACACTTGTGGTTAACATTGGAGACATGTTACAAGCTTGGAGCAATGACAAGTTGAGATCTTCAGAACATAGAGTTGTTTTGAAGCAACCTTGTGTGAATAGATTCTCTTTGGCATTCTTTTGGTGCTTTGAGGATCACAAAGTCATTGTGGCACCCAATGAGGTTGTTGCTCTTCATCATGCCAATAAGAGATTCTATTCTCCCTTTCTTTGCTTGGATTATTTGAAGTTTAGGGAGAATAATCAAAAGGGAAGCTTTGAGAAGGTTGGTTTTACTGTTAGAGATTTTGCTGGAATTTAA 975 0.3754 MSSKSNNNKAYYYADLPILDISQPLEESSLESLSKACKEWGFFHIINHGISKDLCNQLHSLSKCLFSLPSDTKLKLGPFSNVKSYTPPFIASPFFESLRVNGPDFYLSAKSSEDVLFHRTNSKFSETLQEYCSKMAELCEKIVKIVLMSIGEGFEKMFYDDEFRKCHGYLRINNYSAPEEEREEVEGLGMHTDMSCITILYQDEIGGLQVKTNDGEWIDIKPSEGTLVVNIGDMLQAWSNDKLRSSEHRVVLKQPCVNRFSLAFFWCFEDHKVIVAPNEVVALHHANKRFYSPFLCLDYLKFRENNQKGSFEKVGFTVRDFAGI* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0054 324 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 9 319 - -
Ahy12g0054 324 Pfam 2OG-Fe(II) oxygenase superfamily 171 265 IPR044861 -
Ahy12g0054 324 Gene3D - 1 302 IPR027443 -
Ahy12g0054 324 SUPERFAMILY Clavaminate synthase-like 12 305 - -
Ahy12g0054 324 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 166 269 IPR005123 -
Ahy12g0054 324 Pfam non-haem dioxygenase in morphine synthesis N-terminal 16 86 IPR026992 -
Ahy12g0054 324 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 9 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0054 Ahy-Chr12 1516424 1518376 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g0054 15 266 Glycosyltransferase AT5G59530 30.224 6.16e-21 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0054 - - gmx:100782766 509.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0054 12 1516424 1518376 Ahy2g0017 2 139759 141477 hybridization
Ahy14g2430 14 128799377 128801436 Ahy12g0054 12 1516424 1518376 PCT
Ahy4g2166 4 116709800 116711750 Ahy12g0054 12 1516424 1518376 PCT
Ahy12g0054 12 1516424 1518376 Ahy14g2430 14 128799377 128801436 PCT
Ahy12g0054 12 1516424 1518376 Ahy4g2166 4 116709800 116711750 PCT