Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0049 ATGGAGCAACTGCAAGCAATGGATATGACCTTTGATCATTTCAAATTAAAATTCCTAACTAATGATCAAACTGTGGGAAGCATTTCTAGCTGGTATGAAGTTGATAAGAAGAAATGGACAGAAGCAATTAGCAATTTACAGGAGAAAGTAAAGTTGATGAAGAGTGATTATTGTCAACTTTCTCTTGAAGCGCATGAATGCGTTGATTCAATCCCAGAATTAAATAAGATGGTATTTGCAATTCAGGAATTGGTTAAGCAGTGTGAAGATCTCAAAGTGAAGTACAATGAAGAGATACAGAGAAAAAAGCTCTTCAGTGAACTTCAAGAGTCTAAAGGGAACATTAGGGTTTTCTGCCGTTGCCGTCCCTTAAATAAGGACGAGATCTCCGCTGGCTGTACTACAGTTTTGGATTTTGGTGCAGCAAAGGATGGAATTTTGACAACTAGTATGCCAAAAAAACAATACAGATTTGACAGAGTTTATACACCAAAAGATGATCAAGTTGATGTTTTTGCTGATGCCTCATCAATGGTAACATCTGTGTTGGACGGCTACAATGTATGCATATTTGCTTATGGGCCAACAGGAGCAGGAAAGACATTTACCATGGAGGGAACAGAGCTGAATAGAGGAGTAAATTATAGGACTCTTGAGCTCTTGTTCGACCAGAAAAAAAGGAGTGATACATTTTCTTATGACATATCTGTTAGTGTACTTGAGGTTTATAATGAACAAATCAGAGACCTATTGGCTACAGGATCAACAACAAAAAGGTTGGAGATAAAACAAGGCTCTAAAGGATCTCATTACATTCCTGGTGTCGTAGAAGCTAAAGTTGAAAATGTTAAGGAGGCCTGGGATGTACTGCAAGCTGGATGCAAAGCTAGAGCAGTGGAAAGTAATACTGTTAATAAGCATAGTAGTAGATCTCACTGCATACTTTGTATAATGGTAATGGCTAAAAATTTGCTGAATGGTGAGTGTACCAAGAGTAAGCTTCGGCTTGTGGATTTGGCGGGTAGTGAGAGACTTGCAAAGACAGATGTGCAAGGGGAGCGGCTTAAGGAAACACAAAATATCAACCTATCTCTTTCGGCTCTTGGCACTGTTATATCTGCTTTAGCAGCGAAGAGTAGGCACATTCCCTATAGGAACTCAAAATTGACACATTTACTTGAAGACTCTTTAGGGGGTGACTCTAAAACTTTGATGTTCCAGCAAATCAGTCCATCGGACAAGGACTTAGATGAAACCCTTAGCTCACTTAATTTCGCAACTAGAGTGAGGGGTGTTGTGTTAGGTTCCGGTAAGATGCAAGTTGACACAAGTGAACTTCAAAAGACAAAAGCAATGCTTGAAGAACTTGAAGGTCAGATTGAGTTGAAGACATCTATGCAAAACCAGTCAGAAAAACAAATTTCTCAGTTGTCGGAGAAATTGAAAATAAAAGAAGAAACCTGCAGAAAGCAGAAAGAAAAAGATGAAGGAGCTCGAGAAAAAGCTTAA 1509 0.389 MEQLQAMDMTFDHFKLKFLTNDQTVGSISSWYEVDKKKWTEAISNLQEKVKLMKSDYCQLSLEAHECVDSIPELNKMVFAIQELVKQCEDLKVKYNEEIQRKKLFSELQESKGNIRVFCRCRPLNKDEISAGCTTVLDFGAAKDGILTTSMPKKQYRFDRVYTPKDDQVDVFADASSMVTSVLDGYNVCIFAYGPTGAGKTFTMEGTELNRGVNYRTLELLFDQKKRSDTFSYDISVSVLEVYNEQIRDLLATGSTTKRLEIKQGSKGSHYIPGVVEAKVENVKEAWDVLQAGCKARAVESNTVNKHSSRSHCILCIMVMAKNLLNGECTKSKLRLVDLAGSERLAKTDVQGERLKETQNINLSLSALGTVISALAAKSRHIPYRNSKLTHLLEDSLGGDSKTLMFQQISPSDKDLDETLSSLNFATRVRGVVLGSGKMQVDTSELQKTKAMLEELEGQIELKTSMQNQSEKQISQLSEKLKIKEETCRKQKEKDEGAREKA* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0049 502 Gene3D Kinesin motor domain 60 433 IPR036961 -
Ahy12g0049 502 Coils Coil 81 101 - -
Ahy12g0049 502 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 114 468 IPR027417 -
Ahy12g0049 502 SMART kinesin_4 112 440 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ahy12g0049 502 Coils Coil 439 494 - -
Ahy12g0049 502 ProSitePatterns Kinesin motor domain signature. 332 343 IPR019821 GO:0003777|GO:0005524|GO:0007018
Ahy12g0049 502 Coils Coil 36 56 - -
Ahy12g0049 502 ProSiteProfiles Kinesin motor domain profile. 114 432 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ahy12g0049 502 CDD KISc_C_terminal 112 434 - -
Ahy12g0049 502 Pfam Kinesin motor domain 120 431 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ahy12g0049 502 PANTHER KINESIN-LIKE PROTEIN KLP-3 3 455 - -
Ahy12g0049 502 PANTHER KINESIN-LIKE PROTEIN KLP-3 455 495 - -
Ahy12g0049 502 PRINTS Kinesin heavy chain signature 185 206 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ahy12g0049 502 PRINTS Kinesin heavy chain signature 382 403 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ahy12g0049 502 PRINTS Kinesin heavy chain signature 333 351 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ahy12g0049 502 PRINTS Kinesin heavy chain signature 302 319 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Ahy12g0049 502 PANTHER KINESIN-LIKE PROTEIN KIN-14R 3 455 - -
Ahy12g0049 502 PANTHER KINESIN-LIKE PROTEIN KIN-14R 455 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0049 Ahy-Chr12 1476103 1479096 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g0049 87 453 Calmodulin-binding Proteins AT5G65930 41.953 1.69e-84 282