Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0024 ATGCATGCATATTCAGTTTTCAGCTCAAAAGCTCCATATCCATTTCAAATTTCCCGCTTGCCGCCCTCAAACATGGTGGTGGATCGTTTCGATTCTTGCATTGCTTTTGGTGGGAAGGGTTTTGGTTGTGCTTTTCTCGGGAACTCAAGAACTATCCTGAAAGCGCGGTTTAGCGGCATGAACAAGATTGGTATTGCTGCTGCATGTAGTAGTAGTAGTAGTAGTTGGAGGAGTAATAATTCAAGATTGGCTTGTGTAGGAGAGTTCAACTTTTCAAATGTGAAGAGAATAGGGAAACTTTGTGGCAACAGTTCTAATTTTCGCGTTGTGGGAGGTAGGGGATTTTTGTCTAGGTGCCAGGGTGATGATGATTCTTTAGCATATATTAATGGCAATGGCCGGAATATTGATAATGCTGGAGGTGGTCCAAACAAGGTGGGTTCTGATTTGGGTTCCATTTCAGGAGCTGCATCGAGTGAACCCTTGGAAGACGAAAGAACAATTGGGGGTGAAATAAAGCAAGAGGTACAGACAGTGGATGAATTGAAAGAACTGTTGCAAAAGGCCTTGAAGGAACTCGAAGTTGCTAGGCATAATAGTGCCATGTATGAGGAGAGGGTCAAGAAGATATCGGAGAGTGCGATTTCCTTTCAGGATGAAGCATCAAGAGCATGGAATGATGTTAATTCTACTCTTGATATCATCCAGGAAATTGTGGGTGAAGAATTTGTTGCCAAGGAAGCTGTTCAGAAAGCGACTATGGCTCTTTCTTTTGCCGAGGCTAGGCTTCAAGTAGCCATGGAGTCTTTGGAGGTTGTAAAAGGAACTTATGATCCTCGGTCACAAGGTGCCAAAGAGAGTAATGGCGATGAAGATATATTGGAAGAGGAGCAATTGCTTGTGGTTGCTCAAGAAGATATCAAGGAGTGTCAGTCAAATTTAGCGAATTGCGAGACAGAGCTAAGGTGCTTGCAAAAAAGAAAGGAGAATTTGCAGAATGAAGTGAACAAGTTGCATGAAATTGCGGAAAAGGCCCAGACGAATGCAGTAAAAGCCGAGGAGGACGTCACAAACATAATGCTTTTAGCTGAGCAAGCTGTTGCTGATGAACTTAAGGCTGCACAAGTCGTAAATGATGCAGAGATTGCATTATCGAAAGCAGATAAGTCTTCCTCTAGCATTATTGCTGACTCTGGTATCACTCTACAAGAACAAGAGGTTTTGGACGATCCTAAGGAGGAGGTGGTTCAAAATGTTTCTGGTGATGACACTGTTGATACAGACACAGATTCCCAAATTGACAATGAAACTTTGCTTGGCAAGCAATCATCAGACAAGTTTTCTGATAAAACCAGCCAAATTATTGAAGATACGGCACAGTCTGATTATCTGAGTGATCATGAAAATGGACAGTTAGTCTTAGACCCATCTAAAGAAGCTGAAGTTGAAGTAGAGAAAATAATGAATTCAGTTCAAATGAAAAAACAGGAAACACAGAAAGATGTAAGAGACAATCCACCACTTGTTCCCAAGGCATTGTTGAATAAATCTTCCAGATTTTTTCCTGCATCATTCTTCTCTTTTACTATCGAAGGTGATGATTATACACCAGAATCATTTTTCCAAAGTTTCGTGGAGTCAGCACGGAAGCTGTTACCCAAGCTAGTTATTGGGATATTGTTACTTGGAGGGATTGCCTTCTATGCAAACAGAGCAGAGAGGGGTGCGCAATTACTTCAGCAACCAGGAGTAATTACAACCACTGCTGAAGAAGTTTCCACAAGTGCAAAACCTTTGGTTAGACAGCTTCAGAATCTCCCCACGAGGATCAAGAATATTATTGCATCATTACCTGATCAAGAGGTGGATGAGGAGGAAGCATCCCTTTTTGATATGCTTTGGTTATTACTTGCTAGTGTTATTTTTGTGCCAGTGTTTCAGAAAATCCCTGGAGGCAGTCCCGTTCTTGGCTACTTGGCTGCTGGTATCCTTATTGGGCCCTATGGTCTGTCCATCATTCGTCATGTTCATGGGACGAAAGCAATAGCTGAATTTGGAGTTGTTTTCCTGTTATTCAATATTGGCCTTGAGCTCTCTTTTGAAAGGCTTAGTTCAATGAAGAAATATGTCTTTGGATTAGGCTCAGCTCAGGTTTTGGTGACTGCTGTTGTTGTTGGCCTAGTAGCTCATTATGTTTGTGGTCAAGCAGGTCCTGCTGCTATTGTCATTGGGAATGGCCTCGCATTATCATCAACCGCTGTTGTTCTGCAAGTATTACAGGAGAGAGGTGAGAGCACATCACGCCATGGACGAGCCACATTTTCTGTGTTACTTTTTCAGGACTTGGCGGTTGTGGTCTTGCTAATTCTCATACCTCTTATTTCACCAAATTCATCTAAAGGAGGGGTTGGTTTTCAAGCTATTGCTGAAGCTCTTGGTCTGGCTGCTGTTAAGGCAGCAGTTGCCATCACTGTCATTATTGCAGGTGGACGATTGCTACTTCGACCAATATATAGGCAGATTGCAGAAAATCAAAATGCAGAAATATTTTCTGCCAATACACTCTTTGTTATTCTTGGGACAAGTCTTCTCACAGCCAGGGCAGGGCTTTCCATGGCACTAGGAGCATTTTTGGCTGGTTTACTACTAGCTGAAACTGAATTTTCCTTACAAGTGGAATCTGACATTGCTCCATATCGTGGTCTTCTGTTAGGTCTGTTCTTTATGACGGTTGGAATGTCAATTGATCCAAAACTTCTTGTTTCAAAATTTAAAGTCATTATGGGGACGCTGGCACTCTTACTATGTGGCAAGACACTGTTGATTACTGTGATTGGTAGAATTTTCGGTATTTCACTCATTAATGCCATAAGAGTTGGCCTCCTTCTTGCTCCTGGGGGAGAATTTGCATTTGTGGCCTTTGGTGAAGCTGTTAATCAGGGCATAATGTCTTCCCAGATGTCCTCTCTGCTGTTTCTTCTTGTGGGAATTTCAATGGCCCTCACACCATGGCTAGCTGAAGGAGGACAGATGATTGCTTCCCGTTTTGAGCTACATGATGTTAGAAGTTTATTACCTGTAGAAAGTGAGACAGACGATCTGCAAGATCATATCATTATTTGTGGATTTGGACGAGTTGGCCAGATCATTGCACAACTTCTTTCGGAGCGACTTATTCCTTTTGTTGCACTAGACGTCAGAAGTGATAGAGTGGCAATTGGGCGTGCCCTGGATCTCCCAGTGTACTTCGGAGATGCTGGTAGCCGAGAGGTCCTACATAAGGTCGGGGCTGAAAGGGCGAGCGCTGCTGCAGTAACTCTAGATTCTCCTGGTGCAAATTATAGAACAGTTTGGGCTTTAAGCAAGCACTTCCCGAAAGTAAAGACCTTCGTCCGTGCTCATGATGTTGATCATGGATTGAACTTAGAAAAGGCTGGAGCCACTGCTGTTGTCCCAGAGACCTTAGAACCAAGTCTTCAACTAGCAGCTGCAGTGCTAGCTCAGGCTAAGCTTCCAACAACAGAGATTGCAGCAATCATAAATGAATTCAGATCACGCCATTTAGCCGAGCTCACCGAACTATGTGAAGCAAGTGGAAGTTCTCTTGGATATGGATTCAACAGAGCTATGACTATGAGCAAACCCAAATCTCAATCCTCAGATTTCTCAGATGATAACCAAGTCTCTGATGGAACAGTGGCAATATGA 3708 0.4296 MHAYSVFSSKAPYPFQISRLPPSNMVVDRFDSCIAFGGKGFGCAFLGNSRTILKARFSGMNKIGIAAACSSSSSSWRSNNSRLACVGEFNFSNVKRIGKLCGNSSNFRVVGGRGFLSRCQGDDDSLAYINGNGRNIDNAGGGPNKVGSDLGSISGAASSEPLEDERTIGGEIKQEVQTVDELKELLQKALKELEVARHNSAMYEERVKKISESAISFQDEASRAWNDVNSTLDIIQEIVGEEFVAKEAVQKATMALSFAEARLQVAMESLEVVKGTYDPRSQGAKESNGDEDILEEEQLLVVAQEDIKECQSNLANCETELRCLQKRKENLQNEVNKLHEIAEKAQTNAVKAEEDVTNIMLLAEQAVADELKAAQVVNDAEIALSKADKSSSSIIADSGITLQEQEVLDDPKEEVVQNVSGDDTVDTDTDSQIDNETLLGKQSSDKFSDKTSQIIEDTAQSDYLSDHENGQLVLDPSKEAEVEVEKIMNSVQMKKQETQKDVRDNPPLVPKALLNKSSRFFPASFFSFTIEGDDYTPESFFQSFVESARKLLPKLVIGILLLGGIAFYANRAERGAQLLQQPGVITTTAEEVSTSAKPLVRQLQNLPTRIKNIIASLPDQEVDEEEASLFDMLWLLLASVIFVPVFQKIPGGSPVLGYLAAGILIGPYGLSIIRHVHGTKAIAEFGVVFLLFNIGLELSFERLSSMKKYVFGLGSAQVLVTAVVVGLVAHYVCGQAGPAAIVIGNGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQDLAVVVLLILIPLISPNSSKGGVGFQAIAEALGLAAVKAAVAITVIIAGGRLLLRPIYRQIAENQNAEIFSANTLFVILGTSLLTARAGLSMALGAFLAGLLLAETEFSLQVESDIAPYRGLLLGLFFMTVGMSIDPKLLVSKFKVIMGTLALLLCGKTLLITVIGRIFGISLINAIRVGLLLAPGGEFAFVAFGEAVNQGIMSSQMSSLLFLLVGISMALTPWLAEGGQMIASRFELHDVRSLLPVESETDDLQDHIIICGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERASAAAVTLDSPGANYRTVWALSKHFPKVKTFVRAHDVDHGLNLEKAGATAVVPETLEPSLQLAAAVLAQAKLPTTEIAAIINEFRSRHLAELTELCEASGSSLGYGFNRAMTMSKPKSQSSDFSDDNQVSDGTVAI* 1236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0024 1235 Pfam Sodium/hydrogen exchanger family 634 1005 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Ahy12g0024 1235 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1034 1175 IPR036291 -
Ahy12g0024 1235 Coils Coil 172 206 - -
Ahy12g0024 1235 Gene3D - 1033 1197 - -
Ahy12g0024 1235 TIGRFAM 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 636 916 IPR004771 GO:0006812|GO:0008324|GO:0016021
Ahy12g0024 1235 ProSiteProfiles RCK N-terminal domain profile. 1037 1159 IPR003148 GO:0006813
Ahy12g0024 1235 MobiDBLite consensus disorder prediction 420 445 - -
Ahy12g0024 1235 Gene3D - 625 1012 IPR038770 -
Ahy12g0024 1235 Coils Coil 477 497 - -
Ahy12g0024 1235 Coils Coil 293 355 - -
Ahy12g0024 1235 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 38 1235 - -
Ahy12g0024 1235 MobiDBLite consensus disorder prediction 138 164 - -
Ahy12g0024 1235 PANTHER K(+) EFFLUX ANTIPORTER 1, CHLOROPLASTIC-RELATED 38 1235 - -
Ahy12g0024 1235 MobiDBLite consensus disorder prediction 1213 1235 - -
Ahy12g0024 1235 MobiDBLite consensus disorder prediction 419 445 - -
Ahy12g0024 1235 Pfam TrkA-N domain 1038 1151 IPR003148 GO:0006813
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0024 Ahy-Chr12 1283067 1291261 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g0024 114 1235 Inorganic Solute Cotransporters AT4G00630 68.134 0.0 1368
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0024 - - adu:107460050 2141.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0024 12 1283067 1291261 Ahy12g0024 12 1283067 1291261 ECH
Ahy14g2387 14 126666962 126677512 Ahy12g0024 12 1283067 1291261 PCT
Ahy4g2104 4 114985254 114996121 Ahy12g0024 12 1283067 1291261 PCT
Ahy12g0024 12 1283067 1291261 Ahy14g2387 14 126666962 126677512 PCT
Ahy12g0024 12 1283067 1291261 Ahy4g2104 4 114985254 114996121 PCT